RNA–Protein interactions for RNA: ENST00000405158.2

SAA1-202, Transcript of serum amyloid A1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SAA1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1-202ENST00000405158 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
SAA1-202ENST00000405158 ABCC9O60706 1549 aa28.75■■■□□ 2.19
SAA1-202ENST00000405158 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
SAA1-202ENST00000405158 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.94
SAA1-202ENST00000405158 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
SAA1-202ENST00000405158 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
SAA1-202ENST00000405158 NACADO15069 1562 aa26.88■■□□□ 1.89
SAA1-202ENST00000405158 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
SAA1-202ENST00000405158 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
SAA1-202ENST00000405158 BICRAQ9NZM4 1560 aa26.51■■□□□ 1.83
SAA1-202ENST00000405158 MYO15BQ96JP2 1530 aa26.36■■□□□ 1.81
SAA1-202ENST00000405158 ZCCHC6Q5VYS8 1495 aaKnown RBP26.28■■□□□ 1.8
SAA1-202ENST00000405158 SCRIBQ14160 1630 aa26.14■■□□□ 1.78
SAA1-202ENST00000405158 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
SAA1-202ENST00000405158 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
SAA1-202ENST00000405158 CECR2Q9BXF3 1484 aa25.8■■□□□ 1.72
SAA1-202ENST00000405158 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
SAA1-202ENST00000405158 SHROOM4Q9ULL8 1493 aa25.79■■□□□ 1.72
SAA1-202ENST00000405158 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
SAA1-202ENST00000405158 NCAPD3P42695 1498 aa24.83■■□□□ 1.56
SAA1-202ENST00000405158 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.56
SAA1-202ENST00000405158 DNAJC5Q9H3Z4 198 aa24.74■■□□□ 1.55
SAA1-202ENST00000405158 NESP48681 1621 aa24.72■■□□□ 1.55
SAA1-202ENST00000405158 ERCC6Q03468 1493 aa24.71■■□□□ 1.55
SAA1-202ENST00000405158 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
SAA1-202ENST00000405158 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
SAA1-202ENST00000405158 CUX2O14529 1486 aa24.59■■□□□ 1.53
SAA1-202ENST00000405158 BAZ1AQ9NRL2 1556 aaPredicted RBP24.58■■□□□ 1.52
SAA1-202ENST00000405158 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.52
SAA1-202ENST00000405158 MROH2BQ7Z745 1585 aa24.56■■□□□ 1.52
SAA1-202ENST00000405158 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
SAA1-202ENST00000405158 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
SAA1-202ENST00000405158 KIF21AQ7Z4S6 1674 aa24.41■■□□□ 1.5
SAA1-202ENST00000405158 WIZO95785 1651 aa24.33■■□□□ 1.49
SAA1-202ENST00000405158 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
SAA1-202ENST00000405158 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
SAA1-202ENST00000405158 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
SAA1-202ENST00000405158 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
SAA1-202ENST00000405158 WDR62O43379 1518 aa23.96■■□□□ 1.43
SAA1-202ENST00000405158 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
SAA1-202ENST00000405158 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.42
SAA1-202ENST00000405158 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
SAA1-202ENST00000405158 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
SAA1-202ENST00000405158 CFTRP13569 1480 aa23.81■■□□□ 1.4
SAA1-202ENST00000405158 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
SAA1-202ENST00000405158 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
SAA1-202ENST00000405158 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
SAA1-202ENST00000405158 CCDC88BA6NC98 1476 aa23.63■■□□□ 1.37
SAA1-202ENST00000405158 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
SAA1-202ENST00000405158 OSCARQ8IYS5 282 aa23.47■■□□□ 1.35
SAA1-202ENST00000405158 TOPBP1Q92547 1522 aa23.44■■□□□ 1.34
SAA1-202ENST00000405158 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
SAA1-202ENST00000405158 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
SAA1-202ENST00000405158 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
SAA1-202ENST00000405158 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
SAA1-202ENST00000405158 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
SAA1-202ENST00000405158 DNMBPQ6XZF7 1577 aa23.32■■□□□ 1.32
SAA1-202ENST00000405158 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
SAA1-202ENST00000405158 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.32
SAA1-202ENST00000405158 CHD1O14646 1710 aa23.28■■□□□ 1.32
SAA1-202ENST00000405158 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
SAA1-202ENST00000405158 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
SAA1-202ENST00000405158 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.3
SAA1-202ENST00000405158 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
SAA1-202ENST00000405158 FBLN2P98095 1184 aa23.13■■□□□ 1.29
SAA1-202ENST00000405158 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
SAA1-202ENST00000405158 CUX1P39880 1505 aa23.07■■□□□ 1.28
SAA1-202ENST00000405158 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
SAA1-202ENST00000405158 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
SAA1-202ENST00000405158 SOGA1O94964 1423 aa23.05■■□□□ 1.28
SAA1-202ENST00000405158 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
SAA1-202ENST00000405158 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
SAA1-202ENST00000405158 WDR97A6NE52 1622 aa22.95■■□□□ 1.26
SAA1-202ENST00000405158 SUPT5HO00267 1087 aaKnown RBP22.92■■□□□ 1.26
SAA1-202ENST00000405158 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
SAA1-202ENST00000405158 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
SAA1-202ENST00000405158 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
SAA1-202ENST00000405158 GRIN2BQ13224 1484 aa22.82■■□□□ 1.24
SAA1-202ENST00000405158 TRHP20396 242 aaPredicted RBP22.82■■□□□ 1.24
SAA1-202ENST00000405158 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
SAA1-202ENST00000405158 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
SAA1-202ENST00000405158 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
SAA1-202ENST00000405158 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
SAA1-202ENST00000405158 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
SAA1-202ENST00000405158 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
SAA1-202ENST00000405158 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
SAA1-202ENST00000405158 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
SAA1-202ENST00000405158 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
SAA1-202ENST00000405158 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
SAA1-202ENST00000405158 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
SAA1-202ENST00000405158 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
SAA1-202ENST00000405158 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
SAA1-202ENST00000405158 NUP160Q12769 1436 aa22.48■■□□□ 1.19
SAA1-202ENST00000405158 SHROOM2Q13796 1616 aa22.44■■□□□ 1.18
SAA1-202ENST00000405158 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
SAA1-202ENST00000405158 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
SAA1-202ENST00000405158 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
SAA1-202ENST00000405158 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
SAA1-202ENST00000405158 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
SAA1-202ENST00000405158 JPH4Q96JJ6 628 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms