Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN20P56880 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLDN20P56880 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN20P56880 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 AC134407.3-201ENST00000624035 2139 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN20P56880 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 TBC1D27-202ENST00000424239 1573 ntBASIC12.61□□□□□ -0.39
CLDN20P56880 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 MIR33B-201ENST00000385104 96 ntBASIC12.61□□□□□ -0.39
CLDN20P56880 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CLDN20P56880 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 LINC00265-2P-201ENST00000413372 782 ntBASIC12.61□□□□□ -0.39
CLDN20P56880 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.61□□□□□ -0.39
CLDN20P56880 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.61□□□□□ -0.39
CLDN20P56880 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.61□□□□□ -0.39
CLDN20P56880 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.61□□□□□ -0.39
CLDN20P56880 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.61□□□□□ -0.39
CLDN20P56880 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.61□□□□□ -0.39
CLDN20P56880 YRDCP1-201ENST00000621419 643 ntBASIC12.61□□□□□ -0.39
CLDN20P56880 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 AP001184.1-201ENST00000637936 376 ntBASIC12.61□□□□□ -0.39
CLDN20P56880 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 AC115284.2-201ENST00000624646 2054 ntBASIC12.61□□□□□ -0.39
CLDN20P56880 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.61□□□□□ -0.39
CLDN20P56880 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN20P56880 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 PCDHA6-201ENST00000378126 3267 ntBASIC12.61□□□□□ -0.39
CLDN20P56880 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN20P56880 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CLDN20P56880 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 AGGF1P10-201ENST00000635005 2191 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CLDN20P56880 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CLDN20P56880 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms