Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AL353637.1-201ENST00000451571 732 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 RN7SL258P-201ENST00000478664 300 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC008723.1-201ENST00000506922 207 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC114947.1-202ENST00000514136 344 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC024681.1-201ENST00000521917 487 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 JPT2-214ENST00000569765 782 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AL021707.6-201ENST00000609212 491 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC025183.3-201ENST00000623526 1482 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 STK3-218ENST00000617590 2485 ntTSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AL355102.3-201ENST00000554299 1678 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC093462.1-201ENST00000621167 1683 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AL445209.1-201ENST00000607269 3491 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC022497.1-201ENST00000624916 3691 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC008132.1-202ENST00000342005 1389 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AL133338.1-201ENST00000565695 1517 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 MIR645-201ENST00000385283 94 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SNORA50C-201ENST00000408535 133 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 KRTAP19-9P-201ENST00000421795 191 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 NAGK-204ENST00000443872 878 ntTSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC073150.1-201ENST00000450406 1084 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 REEP1-202ENST00000453231 940 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms