RNA–Protein interactions for RNA: ENST00000554299.1

AL355102.3-201, humanhuman

BASIC

Gene AL355102.3, Length 1,678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355102.3-201ENST00000554299 NISCHQ9Y2I1 1504 aa29.77■■■□□ 2.36
AL355102.3-201ENST00000554299 CCDC180Q9P1Z9 1646 aa25.6■■□□□ 1.69
AL355102.3-201ENST00000554299 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
AL355102.3-201ENST00000554299 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
AL355102.3-201ENST00000554299 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
AL355102.3-201ENST00000554299 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
AL355102.3-201ENST00000554299 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
AL355102.3-201ENST00000554299 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
AL355102.3-201ENST00000554299 NACADO15069 1562 aa23.71■■□□□ 1.39
AL355102.3-201ENST00000554299 ABCC9O60706 1549 aa23.68■■□□□ 1.38
AL355102.3-201ENST00000554299 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
AL355102.3-201ENST00000554299 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
AL355102.3-201ENST00000554299 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
AL355102.3-201ENST00000554299 RB1CC1Q8TDY2 1594 aa23.3■■□□□ 1.32
AL355102.3-201ENST00000554299 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
AL355102.3-201ENST00000554299 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
AL355102.3-201ENST00000554299 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
AL355102.3-201ENST00000554299 WIZO95785 1651 aa22.81■■□□□ 1.24
AL355102.3-201ENST00000554299 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
AL355102.3-201ENST00000554299 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
AL355102.3-201ENST00000554299 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
AL355102.3-201ENST00000554299 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
AL355102.3-201ENST00000554299 LOC105371045A0A1W2PR82 267 aa22.61■■□□□ 1.21
AL355102.3-201ENST00000554299 BICRAQ9NZM4 1560 aa22.6■■□□□ 1.21
AL355102.3-201ENST00000554299 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.21
AL355102.3-201ENST00000554299 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
AL355102.3-201ENST00000554299 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
AL355102.3-201ENST00000554299 CCDC88BA6NC98 1476 aa22.44■■□□□ 1.18
AL355102.3-201ENST00000554299 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
AL355102.3-201ENST00000554299 HRCP23327 699 aa22.33■■□□□ 1.17
AL355102.3-201ENST00000554299 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.16
AL355102.3-201ENST00000554299 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
AL355102.3-201ENST00000554299 TRIM26Q12899 539 aaPredicted RBP22.2■■□□□ 1.15
AL355102.3-201ENST00000554299 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
AL355102.3-201ENST00000554299 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
AL355102.3-201ENST00000554299 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.13
AL355102.3-201ENST00000554299 EEA1Q15075 1411 aa22.07■■□□□ 1.12
AL355102.3-201ENST00000554299 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
AL355102.3-201ENST00000554299 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
AL355102.3-201ENST00000554299 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
AL355102.3-201ENST00000554299 SOGA1O94964 1423 aa21.92■■□□□ 1.1
AL355102.3-201ENST00000554299 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
AL355102.3-201ENST00000554299 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
AL355102.3-201ENST00000554299 CSRNP3Q8WYN3 585 aa21.84■■□□□ 1.09
AL355102.3-201ENST00000554299 EHMT2Q96KQ7 1210 aa21.83■■□□□ 1.09
AL355102.3-201ENST00000554299 SYNJ1O43426 1573 aa21.83■■□□□ 1.08
AL355102.3-201ENST00000554299 GOLGA3Q08378 1498 aa21.77■■□□□ 1.07
AL355102.3-201ENST00000554299 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.07
AL355102.3-201ENST00000554299 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
AL355102.3-201ENST00000554299 ZEB1P37275 1124 aaPredicted RBP21.72■■□□□ 1.07
AL355102.3-201ENST00000554299 KIF21BO75037 1637 aa21.71■■□□□ 1.07
AL355102.3-201ENST00000554299 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
AL355102.3-201ENST00000554299 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
AL355102.3-201ENST00000554299 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
AL355102.3-201ENST00000554299 PPARGC1BQ86YN6 1023 aaKnown RBP21.61■■□□□ 1.05
AL355102.3-201ENST00000554299 CFTRP13569 1480 aa21.6■■□□□ 1.05
AL355102.3-201ENST00000554299 UBTFP17480 764 aaKnown RBP21.58■■□□□ 1.05
AL355102.3-201ENST00000554299 CUX1P39880 1505 aa21.48■■□□□ 1.03
AL355102.3-201ENST00000554299 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
AL355102.3-201ENST00000554299 RAPGEF2Q9Y4G8 1499 aa21.44■■□□□ 1.02
AL355102.3-201ENST00000554299 CLIP1P30622 1438 aa21.43■■□□□ 1.02
AL355102.3-201ENST00000554299 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
AL355102.3-201ENST00000554299 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
AL355102.3-201ENST00000554299 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
AL355102.3-201ENST00000554299 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
AL355102.3-201ENST00000554299 VPS8Q8N3P4 1428 aa21.36■■□□□ 1.01
AL355102.3-201ENST00000554299 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
AL355102.3-201ENST00000554299 CCER1Q8TC90 406 aaPredicted RBP21.17■□□□□ 0.98
AL355102.3-201ENST00000554299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
AL355102.3-201ENST00000554299 ARAP1Q96P48 1450 aa21.14■□□□□ 0.97
AL355102.3-201ENST00000554299 APLP2Q06481 763 aa21.12■□□□□ 0.97
AL355102.3-201ENST00000554299 CUX2O14529 1486 aa21.12■□□□□ 0.97
AL355102.3-201ENST00000554299 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
AL355102.3-201ENST00000554299 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
AL355102.3-201ENST00000554299 TTBK1Q5TCY1 1321 aaPredicted RBP21.11■□□□□ 0.97
AL355102.3-201ENST00000554299 IGF1RP08069 1367 aa21.1■□□□□ 0.97
AL355102.3-201ENST00000554299 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
AL355102.3-201ENST00000554299 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
AL355102.3-201ENST00000554299 CARMIL1Q5VZK9 1371 aa21■□□□□ 0.95
AL355102.3-201ENST00000554299 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
AL355102.3-201ENST00000554299 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
AL355102.3-201ENST00000554299 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
AL355102.3-201ENST00000554299 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
AL355102.3-201ENST00000554299 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
AL355102.3-201ENST00000554299 MAP3K1Q13233 1512 aa20.91■□□□□ 0.94
AL355102.3-201ENST00000554299 NESP48681 1621 aa20.9■□□□□ 0.94
AL355102.3-201ENST00000554299 RRBP1Q9P2E9 1410 aaKnown RBP20.86■□□□□ 0.93
AL355102.3-201ENST00000554299 HNRNPUL2Q1KMD3 747 aaKnown RBP20.85■□□□□ 0.93
AL355102.3-201ENST00000554299 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
AL355102.3-201ENST00000554299 CUL7Q14999 1698 aa20.84■□□□□ 0.93
AL355102.3-201ENST00000554299 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
AL355102.3-201ENST00000554299 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
AL355102.3-201ENST00000554299 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
AL355102.3-201ENST00000554299 WDR97A6NE52 1622 aa20.8■□□□□ 0.92
AL355102.3-201ENST00000554299 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
AL355102.3-201ENST00000554299 EFCAB5A4FU69 1503 aa20.77■□□□□ 0.92
AL355102.3-201ENST00000554299 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
AL355102.3-201ENST00000554299 CLSPNQ9HAW4 1339 aa20.76■□□□□ 0.91
AL355102.3-201ENST00000554299 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
AL355102.3-201ENST00000554299 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms