Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 USP47-202ENST00000339865 7775 ntTSL 2 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDAC11Q96DB2 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AC019109.1-201ENST00000401725 1874 ntBASIC14.17□□□□□ -0.14
HDAC11Q96DB2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AL662890.1-201ENST00000396818 632 ntBASIC14.17□□□□□ -0.14
HDAC11Q96DB2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AC018638.5-201ENST00000450885 754 ntBASIC14.17□□□□□ -0.14
HDAC11Q96DB2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 NDUFS6P1-201ENST00000485187 316 ntBASIC14.17□□□□□ -0.14
HDAC11Q96DB2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AC097724.1-201ENST00000609581 426 ntBASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AC007718.1-201ENST00000621078 280 ntBASIC14.17□□□□□ -0.14
HDAC11Q96DB2 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 AC004241.5-201ENST00000623870 2448 ntBASIC14.17□□□□□ -0.14
HDAC11Q96DB2 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDAC11Q96DB2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
HDAC11Q96DB2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms