Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
LCA10Q71F78 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 RERG-209ENST00000546331 1383 ntTSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC7.48□□□□□ -1.21
LCA10Q71F78 CIITA-212ENST00000618207 2844 ntTSL 5 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 AL109618.1-201ENST00000434910 1683 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC7.48□□□□□ -1.21
LCA10Q71F78 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
LCA10Q71F78 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 ACSM2B-202ENST00000414188 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC7.48□□□□□ -1.21
LCA10Q71F78 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 FAM78A-202ENST00000372269 3659 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC7.48□□□□□ -1.21
LCA10Q71F78 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC211486.1-202ENST00000416371 468 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC7.48□□□□□ -1.21
LCA10Q71F78 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC211476.1-201ENST00000503899 468 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC7.48□□□□□ -1.21
LCA10Q71F78 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC069262.1-201ENST00000539058 672 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 TIMM17BP1-201ENST00000545713 516 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AL512356.2-201ENST00000546955 174 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
LCA10Q71F78 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC7.48□□□□□ -1.21
LCA10Q71F78 AC009955.4-201ENST00000597192 544 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 AC000095.1-201ENST00000603208 874 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 CWC25-202ENST00000614790 3234 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 AL138828.2-201ENST00000615812 383 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 AL137783.1-201ENST00000623494 1896 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC7.48□□□□□ -1.21
LCA10Q71F78 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC7.48□□□□□ -1.21
LCA10Q71F78 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 LINC00342-202ENST00000448494 2351 ntTSL 2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 PCDHGA1-201ENST00000378105 4069 ntAPPRIS ALT2 BASIC7.48□□□□□ -1.21
LCA10Q71F78 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
LCA10Q71F78 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 UGT1A10-201ENST00000344644 2408 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 AL354702.1-201ENST00000442006 1960 ntBASIC7.48□□□□□ -1.21
LCA10Q71F78 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LCA10Q71F78 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCA10Q71F78 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LCA10Q71F78 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LCA10Q71F78 PASK-215ENST00000544142 4724 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
LCA10Q71F78 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC7.47□□□□□ -1.21
LCA10Q71F78 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC7.47□□□□□ -1.21
LCA10Q71F78 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCA10Q71F78 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC7.47□□□□□ -1.21
LCA10Q71F78 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC7.47□□□□□ -1.21
LCA10Q71F78 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCA10Q71F78 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC7.47□□□□□ -1.21
LCA10Q71F78 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCA10Q71F78 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LCA10Q71F78 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms