RNA–Protein interactions for RNA: ENST00000372269.7

FAM78A-202, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM78A, Length 3,659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-202ENST00000372269 NISCHQ9Y2I1 1504 aa22.25■■□□□ 1.15
FAM78A-202ENST00000372269 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
FAM78A-202ENST00000372269 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
FAM78A-202ENST00000372269 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
FAM78A-202ENST00000372269 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
FAM78A-202ENST00000372269 HRCP23327 699 aa20.01■□□□□ 0.79
FAM78A-202ENST00000372269 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
FAM78A-202ENST00000372269 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
FAM78A-202ENST00000372269 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
FAM78A-202ENST00000372269 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
FAM78A-202ENST00000372269 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
FAM78A-202ENST00000372269 TRIM26Q12899 539 aaPredicted RBP19.16■□□□□ 0.66
FAM78A-202ENST00000372269 PELP1Q8IZL8 1130 aaKnown RBP19.11■□□□□ 0.65
FAM78A-202ENST00000372269 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
FAM78A-202ENST00000372269 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
FAM78A-202ENST00000372269 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
FAM78A-202ENST00000372269 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
FAM78A-202ENST00000372269 ZCCHC6Q5VYS8 1495 aaKnown RBP18.8■□□□□ 0.6
FAM78A-202ENST00000372269 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
FAM78A-202ENST00000372269 ABCC9O60706 1549 aa18.71■□□□□ 0.59
FAM78A-202ENST00000372269 TTBK1Q5TCY1 1321 aaPredicted RBP18.69■□□□□ 0.58
FAM78A-202ENST00000372269 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
FAM78A-202ENST00000372269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
FAM78A-202ENST00000372269 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
FAM78A-202ENST00000372269 CENPBP07199 599 aaPredicted RBP18.53■□□□□ 0.56
FAM78A-202ENST00000372269 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
FAM78A-202ENST00000372269 ACIN1Q9UKV3 1341 aaKnown RBP18.52■□□□□ 0.55
FAM78A-202ENST00000372269 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
FAM78A-202ENST00000372269 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
FAM78A-202ENST00000372269 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
FAM78A-202ENST00000372269 MYT1Q01538 1121 aa18.29■□□□□ 0.52
FAM78A-202ENST00000372269 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
FAM78A-202ENST00000372269 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
FAM78A-202ENST00000372269 ZNF316A6NFI3 1004 aaPredicted RBP18.01■□□□□ 0.47
FAM78A-202ENST00000372269 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
FAM78A-202ENST00000372269 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
FAM78A-202ENST00000372269 RANGAP1P46060 587 aaPredicted RBP17.92■□□□□ 0.46
FAM78A-202ENST00000372269 MIER1Q8N108 512 aa17.92■□□□□ 0.46
FAM78A-202ENST00000372269 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
FAM78A-202ENST00000372269 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
FAM78A-202ENST00000372269 APLP2Q06481 763 aa17.77■□□□□ 0.44
FAM78A-202ENST00000372269 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
FAM78A-202ENST00000372269 BCANQ96GW7 911 aa17.61■□□□□ 0.41
FAM78A-202ENST00000372269 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
FAM78A-202ENST00000372269 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.41
FAM78A-202ENST00000372269 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
FAM78A-202ENST00000372269 ITGAEP38570 1179 aa17.49■□□□□ 0.39
FAM78A-202ENST00000372269 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
FAM78A-202ENST00000372269 SOGA1O94964 1423 aa17.46■□□□□ 0.39
FAM78A-202ENST00000372269 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
FAM78A-202ENST00000372269 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
FAM78A-202ENST00000372269 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
FAM78A-202ENST00000372269 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
FAM78A-202ENST00000372269 WIZO95785 1651 aa17.37■□□□□ 0.37
FAM78A-202ENST00000372269 TSHZ2Q9NRE2 1034 aa17.37■□□□□ 0.37
FAM78A-202ENST00000372269 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
FAM78A-202ENST00000372269 NEFLP07196 543 aa17.33■□□□□ 0.36
FAM78A-202ENST00000372269 FKBP8Q14318 412 aa17.33■□□□□ 0.36
FAM78A-202ENST00000372269 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
FAM78A-202ENST00000372269 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
FAM78A-202ENST00000372269 KCNH8Q96L42 1107 aa17.27■□□□□ 0.36
FAM78A-202ENST00000372269 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
FAM78A-202ENST00000372269 CLIP1P30622 1438 aa17.24■□□□□ 0.35
FAM78A-202ENST00000372269 GOLGA3Q08378 1498 aa17.22■□□□□ 0.35
FAM78A-202ENST00000372269 ERICH6Q7L0X2 663 aa17.21■□□□□ 0.35
FAM78A-202ENST00000372269 DDX10Q13206 875 aaKnown RBP17.2■□□□□ 0.34
FAM78A-202ENST00000372269 TRIM52Q96A61 297 aa17.18■□□□□ 0.34
FAM78A-202ENST00000372269 NACADO15069 1562 aa17.18■□□□□ 0.34
FAM78A-202ENST00000372269 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
FAM78A-202ENST00000372269 ATP1B4Q9UN42 357 aaPredicted RBP17.12■□□□□ 0.33
FAM78A-202ENST00000372269 EEA1Q15075 1411 aa17.12■□□□□ 0.33
FAM78A-202ENST00000372269 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
FAM78A-202ENST00000372269 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
FAM78A-202ENST00000372269 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
FAM78A-202ENST00000372269 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
FAM78A-202ENST00000372269 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
FAM78A-202ENST00000372269 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
FAM78A-202ENST00000372269 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
FAM78A-202ENST00000372269 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
FAM78A-202ENST00000372269 ANP32CO43423 234 aa17■□□□□ 0.31
FAM78A-202ENST00000372269 SIN3AQ96ST3 1273 aa16.97■□□□□ 0.31
FAM78A-202ENST00000372269 TOP2AP11388 1531 aaKnown RBP16.93■□□□□ 0.3
FAM78A-202ENST00000372269 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
FAM78A-202ENST00000372269 CDK11AQ9UQ88 783 aaPredicted RBP16.92■□□□□ 0.3
FAM78A-202ENST00000372269 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
FAM78A-202ENST00000372269 HNRNPUQ00839 825 aaKnown RBP eCLIP16.88■□□□□ 0.29
FAM78A-202ENST00000372269 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
FAM78A-202ENST00000372269 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
FAM78A-202ENST00000372269 P3H3Q8IVL6 736 aa16.83■□□□□ 0.28
FAM78A-202ENST00000372269 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
FAM78A-202ENST00000372269 RAB3GAP2Q9H2M9 1393 aa16.79■□□□□ 0.28
FAM78A-202ENST00000372269 KIF21BO75037 1637 aa16.77■□□□□ 0.28
FAM78A-202ENST00000372269 NBR1Q14596 966 aa16.76■□□□□ 0.27
FAM78A-202ENST00000372269 SMARCA4P51532 1647 aa16.75■□□□□ 0.27
FAM78A-202ENST00000372269 MSH5O43196 834 aa16.75■□□□□ 0.27
FAM78A-202ENST00000372269 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
FAM78A-202ENST00000372269 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
FAM78A-202ENST00000372269 FAM9BQ8IZU0 186 aa16.68■□□□□ 0.26
FAM78A-202ENST00000372269 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
FAM78A-202ENST00000372269 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms