RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
LRRC55-201ENST00000497933 NISCHQ9Y2I1 1504 aa18.81■□□□□ 0.6
LRRC55-201ENST00000497933 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
LRRC55-201ENST00000497933 PELP1Q8IZL8 1130 aaKnown RBP18.11■□□□□ 0.49
LRRC55-201ENST00000497933 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
LRRC55-201ENST00000497933 MYT1Q01538 1121 aa17.67■□□□□ 0.42
LRRC55-201ENST00000497933 APLP2Q06481 763 aa17.57■□□□□ 0.4
LRRC55-201ENST00000497933 EHMT2Q96KQ7 1210 aa17.55■□□□□ 0.4
LRRC55-201ENST00000497933 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
LRRC55-201ENST00000497933 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
LRRC55-201ENST00000497933 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
LRRC55-201ENST00000497933 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
LRRC55-201ENST00000497933 ERICH6Q7L0X2 663 aa17.26■□□□□ 0.35
LRRC55-201ENST00000497933 CCER1Q8TC90 406 aaPredicted RBP17.26■□□□□ 0.35
LRRC55-201ENST00000497933 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
LRRC55-201ENST00000497933 HRCP23327 699 aa17.03■□□□□ 0.32
LRRC55-201ENST00000497933 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
LRRC55-201ENST00000497933 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
LRRC55-201ENST00000497933 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
LRRC55-201ENST00000497933 NEFLP07196 543 aa16.88■□□□□ 0.29
LRRC55-201ENST00000497933 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
LRRC55-201ENST00000497933 YTHDC1Q96MU7 727 aaKnown RBP16.83■□□□□ 0.29
LRRC55-201ENST00000497933 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
LRRC55-201ENST00000497933 PPARGC1BQ86YN6 1023 aaKnown RBP16.6■□□□□ 0.25
LRRC55-201ENST00000497933 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
LRRC55-201ENST00000497933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
LRRC55-201ENST00000497933 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
LRRC55-201ENST00000497933 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
LRRC55-201ENST00000497933 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
LRRC55-201ENST00000497933 GTF3C3Q9Y5Q9 886 aa16.28■□□□□ 0.2
LRRC55-201ENST00000497933 MYT1LQ9UL68 1186 aa16.27■□□□□ 0.2
LRRC55-201ENST00000497933 LOC105371045A0A1W2PR82 267 aa16.23■□□□□ 0.19
LRRC55-201ENST00000497933 ITGAEP38570 1179 aa16.23■□□□□ 0.19
LRRC55-201ENST00000497933 ABCC9O60706 1549 aa16.19■□□□□ 0.18
LRRC55-201ENST00000497933 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
LRRC55-201ENST00000497933 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
LRRC55-201ENST00000497933 ACIN1Q9UKV3 1341 aaKnown RBP16.1■□□□□ 0.17
LRRC55-201ENST00000497933 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
LRRC55-201ENST00000497933 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
LRRC55-201ENST00000497933 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
LRRC55-201ENST00000497933 BCANQ96GW7 911 aa15.91■□□□□ 0.14
LRRC55-201ENST00000497933 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
LRRC55-201ENST00000497933 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
LRRC55-201ENST00000497933 TRIM52Q96A61 297 aa15.83■□□□□ 0.12
LRRC55-201ENST00000497933 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
LRRC55-201ENST00000497933 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
LRRC55-201ENST00000497933 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
LRRC55-201ENST00000497933 FBLN2P98095 1184 aa15.74■□□□□ 0.11
LRRC55-201ENST00000497933 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.1
LRRC55-201ENST00000497933 ANP32CO43423 234 aa15.68■□□□□ 0.1
LRRC55-201ENST00000497933 NEUROD1Q13562 356 aa15.68■□□□□ 0.1
LRRC55-201ENST00000497933 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.08
LRRC55-201ENST00000497933 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
LRRC55-201ENST00000497933 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
LRRC55-201ENST00000497933 ANP32AP39687 249 aaKnown RBP15.56■□□□□ 0.08
LRRC55-201ENST00000497933 ZCCHC6Q5VYS8 1495 aaKnown RBP15.55■□□□□ 0.08
LRRC55-201ENST00000497933 ZBTB47Q9UFB7 747 aaPredicted RBP15.54■□□□□ 0.08
LRRC55-201ENST00000497933 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
LRRC55-201ENST00000497933 EIF5BO60841 1220 aaKnown RBP15.53■□□□□ 0.08
LRRC55-201ENST00000497933 FKBP8Q14318 412 aa15.51■□□□□ 0.07
LRRC55-201ENST00000497933 GLIPR1L2Q4G1C9 344 aa15.44■□□□□ 0.06
LRRC55-201ENST00000497933 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
LRRC55-201ENST00000497933 ZNF777Q9ULD5 760 aaPredicted RBP15.44■□□□□ 0.06
LRRC55-201ENST00000497933 ANP32EQ9BTT0 268 aa15.42■□□□□ 0.06
LRRC55-201ENST00000497933 NEFMP07197 916 aa15.41■□□□□ 0.06
LRRC55-201ENST00000497933 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
LRRC55-201ENST00000497933 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
LRRC55-201ENST00000497933 NPM2Q86SE8 214 aaKnown RBP15.36■□□□□ 0.05
LRRC55-201ENST00000497933 ANP32BQ92688 251 aaKnown RBP15.36■□□□□ 0.05
LRRC55-201ENST00000497933 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
LRRC55-201ENST00000497933 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
LRRC55-201ENST00000497933 NBR1Q14596 966 aa15.32■□□□□ 0.04
LRRC55-201ENST00000497933 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
LRRC55-201ENST00000497933 MIER1Q8N108 512 aa15.27■□□□□ 0.04
LRRC55-201ENST00000497933 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
LRRC55-201ENST00000497933 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
LRRC55-201ENST00000497933 UPF2Q9HAU5 1272 aaKnown RBP15.23■□□□□ 0.03
LRRC55-201ENST00000497933 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
LRRC55-201ENST00000497933 BCL11AQ9H165 835 aa15.22■□□□□ 0.03
LRRC55-201ENST00000497933 HNRNPUQ00839 825 aaKnown RBP eCLIP15.2■□□□□ 0.02
LRRC55-201ENST00000497933 TSPY4P0CV99 314 aa15.2■□□□□ 0.02
LRRC55-201ENST00000497933 TSPY10P0CW01 314 aa15.2■□□□□ 0.02
LRRC55-201ENST00000497933 CHGAP10645 457 aaKnown RBP15.19■□□□□ 0.02
LRRC55-201ENST00000497933 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
LRRC55-201ENST00000497933 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
LRRC55-201ENST00000497933 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
LRRC55-201ENST00000497933 EEA1Q15075 1411 aa15.15■□□□□ 0.02
LRRC55-201ENST00000497933 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.02
LRRC55-201ENST00000497933 NACADO15069 1562 aa15.11■□□□□ 0.01
LRRC55-201ENST00000497933 CHIC2Q9UKJ5 165 aa15.11■□□□□ 0.01
LRRC55-201ENST00000497933 CLIP1P30622 1438 aa15.11■□□□□ 0.01
LRRC55-201ENST00000497933 CCDC136Q96JN2 1154 aa15.11■□□□□ 0.01
LRRC55-201ENST00000497933 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
LRRC55-201ENST00000497933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.08■□□□□ 0
LRRC55-201ENST00000497933 RSF1Q96T23 1441 aaPredicted RBP15.07■□□□□ 0
LRRC55-201ENST00000497933 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.06■□□□□ 0
LRRC55-201ENST00000497933 FAM9BQ8IZU0 186 aa15.05■□□□□ 0
LRRC55-201ENST00000497933 IRX6P78412 446 aaPredicted RBP15.03■□□□□ -0
LRRC55-201ENST00000497933 GOLGA3Q08378 1498 aa15.02■□□□□ -0
LRRC55-201ENST00000497933 SUPT16HQ9Y5B9 1047 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms