RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 MYT1Q01538 1121 aa17.56■□□□□ 0.4
SIM1-202ENST00000369208 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
SIM1-202ENST00000369208 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
SIM1-202ENST00000369208 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
SIM1-202ENST00000369208 FAM9AQ8IZU1 332 aaPredicted RBP15.98■□□□□ 0.15
SIM1-202ENST00000369208 ERICH6Q7L0X2 663 aa15.76■□□□□ 0.11
SIM1-202ENST00000369208 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
SIM1-202ENST00000369208 CENPBP07199 599 aaPredicted RBP15.75■□□□□ 0.11
SIM1-202ENST00000369208 NISCHQ9Y2I1 1504 aa15.74■□□□□ 0.11
SIM1-202ENST00000369208 SUPT5HO00267 1087 aaKnown RBP15.67■□□□□ 0.1
SIM1-202ENST00000369208 APLP2Q06481 763 aa15.63■□□□□ 0.09
SIM1-202ENST00000369208 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
SIM1-202ENST00000369208 ZEB1P37275 1124 aaPredicted RBP15.54■□□□□ 0.08
SIM1-202ENST00000369208 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
SIM1-202ENST00000369208 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
SIM1-202ENST00000369208 NEFLP07196 543 aa14.97□□□□□ -0.01
SIM1-202ENST00000369208 HRCP23327 699 aa14.93□□□□□ -0.02
SIM1-202ENST00000369208 ATP1B4Q9UN42 357 aaPredicted RBP14.91□□□□□ -0.02
SIM1-202ENST00000369208 GLIPR1L2Q4G1C9 344 aa14.91□□□□□ -0.02
SIM1-202ENST00000369208 MYT1LQ9UL68 1186 aa14.87□□□□□ -0.03
SIM1-202ENST00000369208 PCGF6Q9BYE7 350 aa14.86□□□□□ -0.03
SIM1-202ENST00000369208 RANGAP1P46060 587 aaPredicted RBP14.73□□□□□ -0.05
SIM1-202ENST00000369208 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
SIM1-202ENST00000369208 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
SIM1-202ENST00000369208 UBTFP17480 764 aaKnown RBP14.7□□□□□ -0.06
SIM1-202ENST00000369208 CLSPNQ9HAW4 1339 aa14.65□□□□□ -0.06
SIM1-202ENST00000369208 DAXXQ9UER7 740 aaPredicted RBP14.57□□□□□ -0.08
SIM1-202ENST00000369208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
SIM1-202ENST00000369208 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
SIM1-202ENST00000369208 TRIM26Q12899 539 aaPredicted RBP14.43□□□□□ -0.1
SIM1-202ENST00000369208 GTF3C3Q9Y5Q9 886 aa14.32□□□□□ -0.12
SIM1-202ENST00000369208 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
SIM1-202ENST00000369208 ACIN1Q9UKV3 1341 aaKnown RBP14.28□□□□□ -0.12
SIM1-202ENST00000369208 ZNF316A6NFI3 1004 aaPredicted RBP14.22□□□□□ -0.13
SIM1-202ENST00000369208 EIF5BO60841 1220 aaKnown RBP14.21□□□□□ -0.14
SIM1-202ENST00000369208 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
SIM1-202ENST00000369208 DIEXFQ68CQ4 756 aaKnown RBP14.19□□□□□ -0.14
SIM1-202ENST00000369208 CHIC1Q5VXU3 224 aa14.18□□□□□ -0.14
SIM1-202ENST00000369208 BCL11AQ9H165 835 aa14.18□□□□□ -0.14
SIM1-202ENST00000369208 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
SIM1-202ENST00000369208 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
SIM1-202ENST00000369208 ANP32EQ9BTT0 268 aa14.1□□□□□ -0.15
SIM1-202ENST00000369208 ITGAEP38570 1179 aa14.08□□□□□ -0.16
SIM1-202ENST00000369208 NCLP19338 710 aaKnown RBP14.03□□□□□ -0.16
SIM1-202ENST00000369208 ANP32AP39687 249 aaKnown RBP14.02□□□□□ -0.17
SIM1-202ENST00000369208 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
SIM1-202ENST00000369208 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
SIM1-202ENST00000369208 ESF1Q9H501 851 aaKnown RBP13.94□□□□□ -0.18
SIM1-202ENST00000369208 NEFMP07197 916 aa13.92□□□□□ -0.18
SIM1-202ENST00000369208 ABCC9O60706 1549 aa13.92□□□□□ -0.18
SIM1-202ENST00000369208 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
SIM1-202ENST00000369208 FBLN2P98095 1184 aa13.91□□□□□ -0.18
SIM1-202ENST00000369208 BCANQ96GW7 911 aa13.91□□□□□ -0.18
SIM1-202ENST00000369208 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
SIM1-202ENST00000369208 ANP32BQ92688 251 aaKnown RBP13.88□□□□□ -0.19
SIM1-202ENST00000369208 ERICH6BQ5W0A0 696 aa13.88□□□□□ -0.19
SIM1-202ENST00000369208 TRIM52Q96A61 297 aa13.88□□□□□ -0.19
SIM1-202ENST00000369208 FAM50AQ14320 339 aaKnown RBP13.85□□□□□ -0.19
SIM1-202ENST00000369208 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
SIM1-202ENST00000369208 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
SIM1-202ENST00000369208 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
SIM1-202ENST00000369208 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.2
SIM1-202ENST00000369208 ZNF326Q5BKZ1 582 aaKnown RBP13.76□□□□□ -0.21
SIM1-202ENST00000369208 CDK11BP21127 795 aaKnown RBP13.73□□□□□ -0.21
SIM1-202ENST00000369208 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
SIM1-202ENST00000369208 CANXP27824 592 aaKnown RBP13.65□□□□□ -0.22
SIM1-202ENST00000369208 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
SIM1-202ENST00000369208 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
SIM1-202ENST00000369208 PRKCSHP14314 528 aaPredicted RBP13.61□□□□□ -0.23
SIM1-202ENST00000369208 NEUROD1Q13562 356 aa13.59□□□□□ -0.23
SIM1-202ENST00000369208 ANP32CO43423 234 aa13.56□□□□□ -0.24
SIM1-202ENST00000369208 PTMSP20962 102 aa13.54□□□□□ -0.24
SIM1-202ENST00000369208 DDRGK1Q96HY6 314 aa13.52□□□□□ -0.24
SIM1-202ENST00000369208 NBR1Q14596 966 aa13.52□□□□□ -0.25
SIM1-202ENST00000369208 ZNF777Q9ULD5 760 aaPredicted RBP13.51□□□□□ -0.25
SIM1-202ENST00000369208 PPM1GO15355 546 aaPredicted RBP13.49□□□□□ -0.25
SIM1-202ENST00000369208 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
SIM1-202ENST00000369208 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
SIM1-202ENST00000369208 HSP90AA1P07900 732 aaKnown RBP13.45□□□□□ -0.26
SIM1-202ENST00000369208 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
SIM1-202ENST00000369208 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
SIM1-202ENST00000369208 FKBP8Q14318 412 aa13.43□□□□□ -0.26
SIM1-202ENST00000369208 PODXL2Q9NZ53 605 aa13.43□□□□□ -0.26
SIM1-202ENST00000369208 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
SIM1-202ENST00000369208 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
SIM1-202ENST00000369208 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
SIM1-202ENST00000369208 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
SIM1-202ENST00000369208 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
SIM1-202ENST00000369208 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
SIM1-202ENST00000369208 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
SIM1-202ENST00000369208 ARID4BQ4LE39 1312 aaPredicted RBP13.35□□□□□ -0.27
SIM1-202ENST00000369208 NOP58Q9Y2X3 529 aaKnown RBP13.35□□□□□ -0.27
SIM1-202ENST00000369208 L1TD1Q5T7N2 865 aaKnown RBP13.34□□□□□ -0.27
SIM1-202ENST00000369208 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
SIM1-202ENST00000369208 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
SIM1-202ENST00000369208 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
SIM1-202ENST00000369208 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
SIM1-202ENST00000369208 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
SIM1-202ENST00000369208 BECN1Q14457 450 aa13.3□□□□□ -0.28
SIM1-202ENST00000369208 C14orf37Q86TY3 774 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms