RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
PCDHGA1-201ENST00000378105 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
PCDHGA1-201ENST00000378105 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
PCDHGA1-201ENST00000378105 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
PCDHGA1-201ENST00000378105 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
PCDHGA1-201ENST00000378105 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
PCDHGA1-201ENST00000378105 DCAF8L2P0C7V8 631 aa19.53■□□□□ 0.72
PCDHGA1-201ENST00000378105 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
PCDHGA1-201ENST00000378105 NACADO15069 1562 aa19.28■□□□□ 0.68
PCDHGA1-201ENST00000378105 ABCC9O60706 1549 aa19.11■□□□□ 0.65
PCDHGA1-201ENST00000378105 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
PCDHGA1-201ENST00000378105 PELP1Q8IZL8 1130 aaKnown RBP18.8■□□□□ 0.6
PCDHGA1-201ENST00000378105 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
PCDHGA1-201ENST00000378105 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
PCDHGA1-201ENST00000378105 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
PCDHGA1-201ENST00000378105 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
PCDHGA1-201ENST00000378105 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
PCDHGA1-201ENST00000378105 MYT1Q01538 1121 aa18.35■□□□□ 0.53
PCDHGA1-201ENST00000378105 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
PCDHGA1-201ENST00000378105 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
PCDHGA1-201ENST00000378105 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
PCDHGA1-201ENST00000378105 WIZO95785 1651 aa18.22■□□□□ 0.51
PCDHGA1-201ENST00000378105 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
PCDHGA1-201ENST00000378105 PRDM2Q13029 1718 aa18.13■□□□□ 0.49
PCDHGA1-201ENST00000378105 PRKCSHP14314 528 aaPredicted RBP18.12■□□□□ 0.49
PCDHGA1-201ENST00000378105 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
PCDHGA1-201ENST00000378105 HMGXB3Q12766 1538 aa17.97■□□□□ 0.47
PCDHGA1-201ENST00000378105 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
PCDHGA1-201ENST00000378105 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
PCDHGA1-201ENST00000378105 TOP2AP11388 1531 aaKnown RBP17.84■□□□□ 0.45
PCDHGA1-201ENST00000378105 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
PCDHGA1-201ENST00000378105 PPARGC1BQ86YN6 1023 aaKnown RBP17.76■□□□□ 0.43
PCDHGA1-201ENST00000378105 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
PCDHGA1-201ENST00000378105 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
PCDHGA1-201ENST00000378105 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
PCDHGA1-201ENST00000378105 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
PCDHGA1-201ENST00000378105 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
PCDHGA1-201ENST00000378105 KIF21AQ7Z4S6 1674 aa17.56■□□□□ 0.4
PCDHGA1-201ENST00000378105 HRCP23327 699 aa17.54■□□□□ 0.4
PCDHGA1-201ENST00000378105 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
PCDHGA1-201ENST00000378105 FAM9AQ8IZU1 332 aaPredicted RBP17.5■□□□□ 0.39
PCDHGA1-201ENST00000378105 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCDHGA1-201ENST00000378105 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
PCDHGA1-201ENST00000378105 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
PCDHGA1-201ENST00000378105 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
PCDHGA1-201ENST00000378105 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
PCDHGA1-201ENST00000378105 CFTRP13569 1480 aa17.29■□□□□ 0.36
PCDHGA1-201ENST00000378105 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
PCDHGA1-201ENST00000378105 ERICH6Q7L0X2 663 aa17.26■□□□□ 0.35
PCDHGA1-201ENST00000378105 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
PCDHGA1-201ENST00000378105 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
PCDHGA1-201ENST00000378105 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
PCDHGA1-201ENST00000378105 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
PCDHGA1-201ENST00000378105 NESP48681 1621 aa17.17■□□□□ 0.34
PCDHGA1-201ENST00000378105 WDR62O43379 1518 aa17.13■□□□□ 0.33
PCDHGA1-201ENST00000378105 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
PCDHGA1-201ENST00000378105 CUX1P39880 1505 aa17.1■□□□□ 0.33
PCDHGA1-201ENST00000378105 APLP2Q06481 763 aa17.08■□□□□ 0.32
PCDHGA1-201ENST00000378105 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
PCDHGA1-201ENST00000378105 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
PCDHGA1-201ENST00000378105 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
PCDHGA1-201ENST00000378105 ABCC8Q09428 1581 aa17■□□□□ 0.31
PCDHGA1-201ENST00000378105 PBRM1Q86U86 1689 aa16.92■□□□□ 0.3
PCDHGA1-201ENST00000378105 CUX2O14529 1486 aa16.91■□□□□ 0.3
PCDHGA1-201ENST00000378105 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
PCDHGA1-201ENST00000378105 CENPBP07199 599 aaPredicted RBP16.85■□□□□ 0.29
PCDHGA1-201ENST00000378105 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
PCDHGA1-201ENST00000378105 TRIM41Q8WV44 630 aa16.85■□□□□ 0.29
PCDHGA1-201ENST00000378105 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
PCDHGA1-201ENST00000378105 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
PCDHGA1-201ENST00000378105 TOPBP1Q92547 1522 aa16.77■□□□□ 0.27
PCDHGA1-201ENST00000378105 LRRIQ1Q96JM4 1722 aa16.74■□□□□ 0.27
PCDHGA1-201ENST00000378105 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
PCDHGA1-201ENST00000378105 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
PCDHGA1-201ENST00000378105 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
PCDHGA1-201ENST00000378105 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
PCDHGA1-201ENST00000378105 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
PCDHGA1-201ENST00000378105 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
PCDHGA1-201ENST00000378105 SHROOM2Q13796 1616 aa16.61■□□□□ 0.25
PCDHGA1-201ENST00000378105 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
PCDHGA1-201ENST00000378105 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
PCDHGA1-201ENST00000378105 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
PCDHGA1-201ENST00000378105 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
PCDHGA1-201ENST00000378105 EIF5BO60841 1220 aaKnown RBP16.6■□□□□ 0.25
PCDHGA1-201ENST00000378105 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
PCDHGA1-201ENST00000378105 CHD1O14646 1710 aa16.58■□□□□ 0.24
PCDHGA1-201ENST00000378105 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
PCDHGA1-201ENST00000378105 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
PCDHGA1-201ENST00000378105 CTTNBP2Q8WZ74 1663 aa16.53■□□□□ 0.24
PCDHGA1-201ENST00000378105 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.23
PCDHGA1-201ENST00000378105 KIF21BO75037 1637 aa16.51■□□□□ 0.23
PCDHGA1-201ENST00000378105 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
PCDHGA1-201ENST00000378105 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA1-201ENST00000378105 CLASP1Q7Z460 1538 aa16.46■□□□□ 0.23
PCDHGA1-201ENST00000378105 ANP32EQ9BTT0 268 aa16.46■□□□□ 0.23
PCDHGA1-201ENST00000378105 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
PCDHGA1-201ENST00000378105 CUL7Q14999 1698 aa16.44■□□□□ 0.22
PCDHGA1-201ENST00000378105 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
PCDHGA1-201ENST00000378105 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
PCDHGA1-201ENST00000378105 CCDC136Q96JN2 1154 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms