RNA–Protein interactions for RNA: ENST00000614790.4

CWC25-202, Transcript of CWC25 spliceosome associated protein homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CWC25, Length 3,234 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC25-202ENST00000614790 NISCHQ9Y2I1 1504 aa24.87■■□□□ 1.57
CWC25-202ENST00000614790 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
CWC25-202ENST00000614790 SHROOM4Q9ULL8 1493 aa21.54■■□□□ 1.04
CWC25-202ENST00000614790 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
CWC25-202ENST00000614790 ZCCHC6Q5VYS8 1495 aaKnown RBP20.87■□□□□ 0.93
CWC25-202ENST00000614790 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
CWC25-202ENST00000614790 ABCC9O60706 1549 aa20.73■□□□□ 0.91
CWC25-202ENST00000614790 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
CWC25-202ENST00000614790 SLC24A1O60721 1099 aa20.19■□□□□ 0.82
CWC25-202ENST00000614790 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
CWC25-202ENST00000614790 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
CWC25-202ENST00000614790 NACADO15069 1562 aa19.78■□□□□ 0.76
CWC25-202ENST00000614790 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
CWC25-202ENST00000614790 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
CWC25-202ENST00000614790 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.74
CWC25-202ENST00000614790 MYO15BQ96JP2 1530 aa19.62■□□□□ 0.73
CWC25-202ENST00000614790 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
CWC25-202ENST00000614790 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
CWC25-202ENST00000614790 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
CWC25-202ENST00000614790 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
CWC25-202ENST00000614790 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
CWC25-202ENST00000614790 WIZO95785 1651 aa19.35■□□□□ 0.69
CWC25-202ENST00000614790 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.69
CWC25-202ENST00000614790 TRIM41Q8WV44 630 aa19.24■□□□□ 0.67
CWC25-202ENST00000614790 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
CWC25-202ENST00000614790 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
CWC25-202ENST00000614790 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
CWC25-202ENST00000614790 CCDC88BA6NC98 1476 aa18.92■□□□□ 0.62
CWC25-202ENST00000614790 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
CWC25-202ENST00000614790 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.61
CWC25-202ENST00000614790 PPARGC1BQ86YN6 1023 aaKnown RBP18.78■□□□□ 0.6
CWC25-202ENST00000614790 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
CWC25-202ENST00000614790 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.6
CWC25-202ENST00000614790 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
CWC25-202ENST00000614790 PCGF6Q9BYE7 350 aa18.76■□□□□ 0.59
CWC25-202ENST00000614790 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
CWC25-202ENST00000614790 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
CWC25-202ENST00000614790 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
CWC25-202ENST00000614790 SOGA1O94964 1423 aa18.57■□□□□ 0.56
CWC25-202ENST00000614790 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
CWC25-202ENST00000614790 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
CWC25-202ENST00000614790 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
CWC25-202ENST00000614790 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
CWC25-202ENST00000614790 WRNQ14191 1432 aaPredicted RBP eCLIP18.47■□□□□ 0.55
CWC25-202ENST00000614790 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
CWC25-202ENST00000614790 PRKCSHP14314 528 aaPredicted RBP18.41■□□□□ 0.54
CWC25-202ENST00000614790 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
CWC25-202ENST00000614790 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
CWC25-202ENST00000614790 NCAPD3P42695 1498 aa18.38■□□□□ 0.53
CWC25-202ENST00000614790 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
CWC25-202ENST00000614790 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
CWC25-202ENST00000614790 NESP48681 1621 aa18.25■□□□□ 0.51
CWC25-202ENST00000614790 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
CWC25-202ENST00000614790 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
CWC25-202ENST00000614790 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
CWC25-202ENST00000614790 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
CWC25-202ENST00000614790 CEP162Q5TB80 1403 aa18.13■□□□□ 0.49
CWC25-202ENST00000614790 CFTRP13569 1480 aa18.13■□□□□ 0.49
CWC25-202ENST00000614790 CUX1P39880 1505 aa18.11■□□□□ 0.49
CWC25-202ENST00000614790 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.48
CWC25-202ENST00000614790 HRCP23327 699 aa18.04■□□□□ 0.48
CWC25-202ENST00000614790 GOLGA3Q08378 1498 aa18.02■□□□□ 0.48
CWC25-202ENST00000614790 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
CWC25-202ENST00000614790 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.47
CWC25-202ENST00000614790 P3H3Q8IVL6 736 aa18■□□□□ 0.47
CWC25-202ENST00000614790 CUX2O14529 1486 aa17.99■□□□□ 0.47
CWC25-202ENST00000614790 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
CWC25-202ENST00000614790 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
CWC25-202ENST00000614790 EEA1Q15075 1411 aa17.97■□□□□ 0.47
CWC25-202ENST00000614790 ATP1B4Q9UN42 357 aaPredicted RBP17.97■□□□□ 0.47
CWC25-202ENST00000614790 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
CWC25-202ENST00000614790 FGD5Q6ZNL6 1462 aa17.94■□□□□ 0.46
CWC25-202ENST00000614790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
CWC25-202ENST00000614790 MYT1Q01538 1121 aa17.94■□□□□ 0.46
CWC25-202ENST00000614790 CLIP1P30622 1438 aa17.93■□□□□ 0.46
CWC25-202ENST00000614790 KIF27Q86VH2 1401 aa17.92■□□□□ 0.46
CWC25-202ENST00000614790 APLP2Q06481 763 aa17.9■□□□□ 0.46
CWC25-202ENST00000614790 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
CWC25-202ENST00000614790 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
CWC25-202ENST00000614790 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
CWC25-202ENST00000614790 IGF1RP08069 1367 aa17.79■□□□□ 0.44
CWC25-202ENST00000614790 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
CWC25-202ENST00000614790 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
CWC25-202ENST00000614790 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.44
CWC25-202ENST00000614790 ITGAEP38570 1179 aa17.77■□□□□ 0.43
CWC25-202ENST00000614790 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
CWC25-202ENST00000614790 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
CWC25-202ENST00000614790 KIF21BO75037 1637 aa17.76■□□□□ 0.43
CWC25-202ENST00000614790 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
CWC25-202ENST00000614790 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
CWC25-202ENST00000614790 PRXQ9BXM0 1461 aa17.73■□□□□ 0.43
CWC25-202ENST00000614790 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
CWC25-202ENST00000614790 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
CWC25-202ENST00000614790 KANK4Q5T7N3 995 aaPredicted RBP17.72■□□□□ 0.43
CWC25-202ENST00000614790 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
CWC25-202ENST00000614790 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.43
CWC25-202ENST00000614790 ERICH6Q7L0X2 663 aa17.7■□□□□ 0.42
CWC25-202ENST00000614790 FBLN2P98095 1184 aa17.69■□□□□ 0.42
CWC25-202ENST00000614790 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
CWC25-202ENST00000614790 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms