RNA–Protein interactions for RNA: ENST00000412050.8

CPEB3-202, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPEB3, Length 7,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-202ENST00000412050 DCAF8L2P0C7V8 631 aa17.98■□□□□ 0.47
CPEB3-202ENST00000412050 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
CPEB3-202ENST00000412050 MYT1Q01538 1121 aa17.64■□□□□ 0.41
CPEB3-202ENST00000412050 ERICH6Q7L0X2 663 aa17.54■□□□□ 0.4
CPEB3-202ENST00000412050 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
CPEB3-202ENST00000412050 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
CPEB3-202ENST00000412050 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
CPEB3-202ENST00000412050 TTBK1Q5TCY1 1321 aaPredicted RBP16.61■□□□□ 0.25
CPEB3-202ENST00000412050 DAXXQ9UER7 740 aaPredicted RBP16.54■□□□□ 0.24
CPEB3-202ENST00000412050 APLP2Q06481 763 aa16.52■□□□□ 0.24
CPEB3-202ENST00000412050 FAM9AQ8IZU1 332 aaPredicted RBP16.42■□□□□ 0.22
CPEB3-202ENST00000412050 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
CPEB3-202ENST00000412050 ATP1B4Q9UN42 357 aaPredicted RBP16.28■□□□□ 0.2
CPEB3-202ENST00000412050 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.19
CPEB3-202ENST00000412050 PCGF6Q9BYE7 350 aa16.21■□□□□ 0.19
CPEB3-202ENST00000412050 NEFLP07196 543 aa16.17■□□□□ 0.18
CPEB3-202ENST00000412050 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
CPEB3-202ENST00000412050 CENPBP07199 599 aaPredicted RBP16.16■□□□□ 0.18
CPEB3-202ENST00000412050 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
CPEB3-202ENST00000412050 MYT1LQ9UL68 1186 aa15.99■□□□□ 0.15
CPEB3-202ENST00000412050 ZNF316A6NFI3 1004 aaPredicted RBP15.96■□□□□ 0.15
CPEB3-202ENST00000412050 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
CPEB3-202ENST00000412050 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
CPEB3-202ENST00000412050 POLR3GLQ9BT43 218 aa15.91■□□□□ 0.14
CPEB3-202ENST00000412050 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
CPEB3-202ENST00000412050 BCL11AQ9H165 835 aa15.86■□□□□ 0.13
CPEB3-202ENST00000412050 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
CPEB3-202ENST00000412050 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
CPEB3-202ENST00000412050 RTL5Q5HYW3 569 aaPredicted RBP15.69■□□□□ 0.1
CPEB3-202ENST00000412050 CDK11BP21127 795 aaKnown RBP15.59■□□□□ 0.09
CPEB3-202ENST00000412050 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
CPEB3-202ENST00000412050 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
CPEB3-202ENST00000412050 ZEB1P37275 1124 aaPredicted RBP15.52■□□□□ 0.08
CPEB3-202ENST00000412050 PPARGC1BQ86YN6 1023 aaKnown RBP15.51■□□□□ 0.07
CPEB3-202ENST00000412050 TULP1O00294 542 aaPredicted RBP15.5■□□□□ 0.07
CPEB3-202ENST00000412050 UBTFP17480 764 aaKnown RBP15.48■□□□□ 0.07
CPEB3-202ENST00000412050 ITGAEP38570 1179 aa15.42■□□□□ 0.06
CPEB3-202ENST00000412050 EIF5BO60841 1220 aaKnown RBP15.4■□□□□ 0.06
CPEB3-202ENST00000412050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
CPEB3-202ENST00000412050 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
CPEB3-202ENST00000412050 PRM3Q9NNZ6 103 aa15.23■□□□□ 0.03
CPEB3-202ENST00000412050 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
CPEB3-202ENST00000412050 ANP32BQ92688 251 aaKnown RBP15.14■□□□□ 0.01
CPEB3-202ENST00000412050 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
CPEB3-202ENST00000412050 A0A0G2JS52 829 aa15.11■□□□□ 0.01
CPEB3-202ENST00000412050 BCANQ96GW7 911 aa15.1■□□□□ 0.01
CPEB3-202ENST00000412050 GLIPR1L2Q4G1C9 344 aa15.09■□□□□ 0.01
CPEB3-202ENST00000412050 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
CPEB3-202ENST00000412050 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
CPEB3-202ENST00000412050 CANXP27824 592 aaKnown RBP15.02□□□□□ -0.01
CPEB3-202ENST00000412050 HSP90AA1P07900 732 aaKnown RBP14.96□□□□□ -0.01
CPEB3-202ENST00000412050 ARXQ96QS3 562 aa14.94□□□□□ -0.02
CPEB3-202ENST00000412050 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
CPEB3-202ENST00000412050 NPM2Q86SE8 214 aaKnown RBP14.9□□□□□ -0.02
CPEB3-202ENST00000412050 CLSTN1O94985 981 aa14.9□□□□□ -0.02
CPEB3-202ENST00000412050 NEFMP07197 916 aa14.83□□□□□ -0.04
CPEB3-202ENST00000412050 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
CPEB3-202ENST00000412050 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
CPEB3-202ENST00000412050 HRCP23327 699 aa14.8□□□□□ -0.04
CPEB3-202ENST00000412050 NEUROD1Q13562 356 aa14.79□□□□□ -0.04
CPEB3-202ENST00000412050 TRIM52Q96A61 297 aa14.77□□□□□ -0.05
CPEB3-202ENST00000412050 TRIM44Q96DX7 344 aaPredicted RBP14.77□□□□□ -0.05
CPEB3-202ENST00000412050 FAM50AQ14320 339 aaKnown RBP14.75□□□□□ -0.05
CPEB3-202ENST00000412050 ANP32AP39687 249 aaKnown RBP14.73□□□□□ -0.05
CPEB3-202ENST00000412050 DIEXFQ68CQ4 756 aaKnown RBP14.73□□□□□ -0.05
CPEB3-202ENST00000412050 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
CPEB3-202ENST00000412050 TRIM26Q12899 539 aaPredicted RBP14.72□□□□□ -0.05
CPEB3-202ENST00000412050 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
CPEB3-202ENST00000412050 PLEKHG5O94827 1062 aa14.66□□□□□ -0.06
CPEB3-202ENST00000412050 TPRNQ4KMQ1 711 aa14.65□□□□□ -0.06
CPEB3-202ENST00000412050 NBR1Q14596 966 aa14.63□□□□□ -0.07
CPEB3-202ENST00000412050 ANP32CO43423 234 aa14.61□□□□□ -0.07
CPEB3-202ENST00000412050 PDE4CQ08493 712 aa14.59□□□□□ -0.07
CPEB3-202ENST00000412050 CALRP27797 417 aaKnown RBP14.57□□□□□ -0.08
CPEB3-202ENST00000412050 ANO8Q9HCE9 1232 aaPredicted RBP14.57□□□□□ -0.08
CPEB3-202ENST00000412050 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
CPEB3-202ENST00000412050 UPF2Q9HAU5 1272 aaKnown RBP14.55□□□□□ -0.08
CPEB3-202ENST00000412050 ZRSR1Q15695 479 aaKnown RBP14.51□□□□□ -0.09
CPEB3-202ENST00000412050 NPHP1O15259 732 aa14.5□□□□□ -0.09
CPEB3-202ENST00000412050 FKBP8Q14318 412 aa14.5□□□□□ -0.09
CPEB3-202ENST00000412050 SALL2Q9Y467 1007 aaPredicted RBP14.5□□□□□ -0.09
CPEB3-202ENST00000412050 DNTTIP2Q5QJE6 756 aaKnown RBP14.48□□□□□ -0.09
CPEB3-202ENST00000412050 ESF1Q9H501 851 aaKnown RBP14.47□□□□□ -0.09
CPEB3-202ENST00000412050 APPP05067 770 aa14.47□□□□□ -0.09
CPEB3-202ENST00000412050 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
CPEB3-202ENST00000412050 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
CPEB3-202ENST00000412050 NOC3LQ8WTT2 800 aaKnown RBP14.43□□□□□ -0.1
CPEB3-202ENST00000412050 NISCHQ9Y2I1 1504 aa14.42□□□□□ -0.1
CPEB3-202ENST00000412050 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
CPEB3-202ENST00000412050 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
CPEB3-202ENST00000412050 FBLN2P98095 1184 aa14.4□□□□□ -0.1
CPEB3-202ENST00000412050 ISY1Q9ULR0 285 aaKnown RBP14.38□□□□□ -0.11
CPEB3-202ENST00000412050 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
CPEB3-202ENST00000412050 KAT6BQ8WYB5 2073 aa14.35□□□□□ -0.11
CPEB3-202ENST00000412050 CHGAP10645 457 aaKnown RBP14.35□□□□□ -0.11
CPEB3-202ENST00000412050 NCLP19338 710 aaKnown RBP14.34□□□□□ -0.11
CPEB3-202ENST00000412050 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
CPEB3-202ENST00000412050 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
CPEB3-202ENST00000412050 ARID3CA6NKF2 412 aa14.29□□□□□ -0.12
CPEB3-202ENST00000412050 WWC1Q8IX03 1113 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms