Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
KNTC1P50748 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.03□□□□□ -0.32
KNTC1P50748 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KNTC1P50748 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
KNTC1P50748 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KNTC1P50748 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
KNTC1P50748 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KNTC1P50748 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KNTC1P50748 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
KNTC1P50748 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KNTC1P50748 BX088651.3-201ENST00000418155 352 ntBASIC13.03□□□□□ -0.32
KNTC1P50748 RFNG-202ENST00000429557 994 ntTSL 5 BASIC13.03□□□□□ -0.32
KNTC1P50748 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KNTC1P50748 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.03□□□□□ -0.32
KNTC1P50748 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC13.03□□□□□ -0.32
KNTC1P50748 MIR8071-1-201ENST00000616769 65 ntBASIC13.03□□□□□ -0.32
KNTC1P50748 MIR8071-2-201ENST00000616772 65 ntBASIC13.03□□□□□ -0.32
KNTC1P50748 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KNTC1P50748 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.03□□□□□ -0.32
KNTC1P50748 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.02□□□□□ -0.32
KNTC1P50748 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
KNTC1P50748 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.02□□□□□ -0.32
KNTC1P50748 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC13.02□□□□□ -0.32
KNTC1P50748 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KNTC1P50748 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.02□□□□□ -0.33
KNTC1P50748 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.02□□□□□ -0.33
KNTC1P50748 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
KNTC1P50748 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.02□□□□□ -0.33
KNTC1P50748 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.02□□□□□ -0.33
KNTC1P50748 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
KNTC1P50748 AC132812.1-201ENST00000583145 892 ntBASIC13.02□□□□□ -0.33
KNTC1P50748 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
KNTC1P50748 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
KNTC1P50748 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
KNTC1P50748 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
KNTC1P50748 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 AC023824.1-201ENST00000562945 2975 ntBASIC13.02□□□□□ -0.33
KNTC1P50748 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
KNTC1P50748 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
KNTC1P50748 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KNTC1P50748 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
KNTC1P50748 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.01□□□□□ -0.33
KNTC1P50748 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
KNTC1P50748 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.01□□□□□ -0.33
KNTC1P50748 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.01□□□□□ -0.33
KNTC1P50748 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.01□□□□□ -0.33
KNTC1P50748 SLC25A15P1-201ENST00000456738 342 ntBASIC13.01□□□□□ -0.33
KNTC1P50748 RNA5SP288-201ENST00000516075 93 ntBASIC13.01□□□□□ -0.33
KNTC1P50748 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
KNTC1P50748 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.01□□□□□ -0.33
KNTC1P50748 KF455155.1-201ENST00000604493 303 ntBASIC13.01□□□□□ -0.33
KNTC1P50748 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.01□□□□□ -0.33
KNTC1P50748 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 DMBT1P1-203ENST00000636837 4628 ntBASIC13.01□□□□□ -0.33
KNTC1P50748 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 AC005014.1-201ENST00000432006 2976 ntBASIC13.01□□□□□ -0.33
KNTC1P50748 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
KNTC1P50748 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
KNTC1P50748 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KNTC1P50748 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC13.01□□□□□ -0.33
KNTC1P50748 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms