RNA–Protein interactions for RNA: ENST00000429557.7

RFNG-202, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 5 BASIC

Gene RFNG, Length 994 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-202ENST00000429557 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
RFNG-202ENST00000429557 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
RFNG-202ENST00000429557 ABCC9O60706 1549 aa27.96■■■□□ 2.07
RFNG-202ENST00000429557 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
RFNG-202ENST00000429557 NACADO15069 1562 aa26.79■■□□□ 1.88
RFNG-202ENST00000429557 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
RFNG-202ENST00000429557 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
RFNG-202ENST00000429557 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
RFNG-202ENST00000429557 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
RFNG-202ENST00000429557 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
RFNG-202ENST00000429557 BICRAQ9NZM4 1560 aa26.04■■□□□ 1.76
RFNG-202ENST00000429557 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.762e-8■□□□□ 10.2
RFNG-202ENST00000429557 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
RFNG-202ENST00000429557 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
RFNG-202ENST00000429557 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
RFNG-202ENST00000429557 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
RFNG-202ENST00000429557 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
RFNG-202ENST00000429557 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
RFNG-202ENST00000429557 NCAPD3P42695 1498 aa24.71■■□□□ 1.55
RFNG-202ENST00000429557 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
RFNG-202ENST00000429557 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.53
RFNG-202ENST00000429557 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
RFNG-202ENST00000429557 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
RFNG-202ENST00000429557 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
RFNG-202ENST00000429557 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
RFNG-202ENST00000429557 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
RFNG-202ENST00000429557 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
RFNG-202ENST00000429557 DNAJC5Q9H3Z4 198 aa24.21■■□□□ 1.47
RFNG-202ENST00000429557 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
RFNG-202ENST00000429557 WIZO95785 1651 aa24.12■■□□□ 1.45
RFNG-202ENST00000429557 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
RFNG-202ENST00000429557 NESP48681 1621 aa24.1■■□□□ 1.45
RFNG-202ENST00000429557 CUX2O14529 1486 aa24.1■■□□□ 1.45
RFNG-202ENST00000429557 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
RFNG-202ENST00000429557 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
RFNG-202ENST00000429557 CADPSQ9ULU8 1353 aa23.94■■□□□ 1.42
RFNG-202ENST00000429557 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
RFNG-202ENST00000429557 THOC2Q8NI27 1593 aaKnown RBP23.88■■□□□ 1.41
RFNG-202ENST00000429557 KIF21AQ7Z4S6 1674 aa23.85■■□□□ 1.41
RFNG-202ENST00000429557 CFTRP13569 1480 aa23.75■■□□□ 1.39
RFNG-202ENST00000429557 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
RFNG-202ENST00000429557 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
RFNG-202ENST00000429557 WDR62O43379 1518 aa23.64■■□□□ 1.38
RFNG-202ENST00000429557 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
RFNG-202ENST00000429557 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
RFNG-202ENST00000429557 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
RFNG-202ENST00000429557 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
RFNG-202ENST00000429557 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
RFNG-202ENST00000429557 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
RFNG-202ENST00000429557 DNMBPQ6XZF7 1577 aa23.2■■□□□ 1.3
RFNG-202ENST00000429557 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
RFNG-202ENST00000429557 SUPT5HO00267 1087 aaKnown RBP23.07■■□□□ 1.28
RFNG-202ENST00000429557 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
RFNG-202ENST00000429557 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
RFNG-202ENST00000429557 POLA1P09884 1462 aaPredicted RBP23.02■■□□□ 1.28
RFNG-202ENST00000429557 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
RFNG-202ENST00000429557 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
RFNG-202ENST00000429557 CUX1P39880 1505 aa22.93■■□□□ 1.26
RFNG-202ENST00000429557 WDR97A6NE52 1622 aa22.91■■□□□ 1.26
RFNG-202ENST00000429557 SOGA1O94964 1423 aa22.91■■□□□ 1.26
RFNG-202ENST00000429557 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
RFNG-202ENST00000429557 AQRO60306 1485 aaKnown RBP eCLIP22.88■■□□□ 1.258e-10■■■■□ 22.4
RFNG-202ENST00000429557 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
RFNG-202ENST00000429557 TDRD9Q8NDG6 1382 aaKnown RBP22.77■■□□□ 1.24
RFNG-202ENST00000429557 CHD1O14646 1710 aa22.74■■□□□ 1.23
RFNG-202ENST00000429557 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
RFNG-202ENST00000429557 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
RFNG-202ENST00000429557 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
RFNG-202ENST00000429557 MAGI1Q96QZ7 1491 aaPredicted RBP22.7■■□□□ 1.22
RFNG-202ENST00000429557 TOP2BQ02880 1626 aa22.69■■□□□ 1.22
RFNG-202ENST00000429557 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
RFNG-202ENST00000429557 SNAPC4Q5SXM2 1469 aa22.67■■□□□ 1.22
RFNG-202ENST00000429557 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
RFNG-202ENST00000429557 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
RFNG-202ENST00000429557 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.22
RFNG-202ENST00000429557 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.22
RFNG-202ENST00000429557 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.22
RFNG-202ENST00000429557 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
RFNG-202ENST00000429557 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
RFNG-202ENST00000429557 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
RFNG-202ENST00000429557 SYNJ1O43426 1573 aa22.61■■□□□ 1.21
RFNG-202ENST00000429557 FBLN2P98095 1184 aa22.61■■□□□ 1.21
RFNG-202ENST00000429557 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
RFNG-202ENST00000429557 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
RFNG-202ENST00000429557 CLASP1Q7Z460 1538 aa22.53■■□□□ 1.2
RFNG-202ENST00000429557 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
RFNG-202ENST00000429557 ADAMTS12P58397 1594 aa22.43■■□□□ 1.18
RFNG-202ENST00000429557 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
RFNG-202ENST00000429557 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
RFNG-202ENST00000429557 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
RFNG-202ENST00000429557 CYB5RLQ6IPT4 315 aa22.37■■□□□ 1.17
RFNG-202ENST00000429557 NUP160Q12769 1436 aa22.34■■□□□ 1.17
RFNG-202ENST00000429557 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
RFNG-202ENST00000429557 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
RFNG-202ENST00000429557 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
RFNG-202ENST00000429557 IGF1RP08069 1367 aa22.18■■□□□ 1.14
RFNG-202ENST00000429557 CUL7Q14999 1698 aa22.17■■□□□ 1.14
RFNG-202ENST00000429557 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
RFNG-202ENST00000429557 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
RFNG-202ENST00000429557 JPH4Q96JJ6 628 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms