Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC16.7■□□□□ 0.26
PDE6BP35913 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC16.7■□□□□ 0.26
PDE6BP35913 HMGA1P2-201ENST00000430198 324 ntBASIC16.7■□□□□ 0.26
PDE6BP35913 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC16.7■□□□□ 0.26
PDE6BP35913 RN7SL47P-201ENST00000488710 299 ntBASIC16.7■□□□□ 0.26
PDE6BP35913 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC16.7■□□□□ 0.26
PDE6BP35913 AL450346.2-201ENST00000495602 1024 ntBASIC16.7■□□□□ 0.26
PDE6BP35913 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC16.7■□□□□ 0.26
PDE6BP35913 NAA38-204ENST00000575208 529 ntTSL 3 BASIC16.7■□□□□ 0.26
PDE6BP35913 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC16.7■□□□□ 0.26
PDE6BP35913 AP000553.2-201ENST00000609038 441 ntBASIC16.7■□□□□ 0.26
PDE6BP35913 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PDE6BP35913 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.7■□□□□ 0.26
PDE6BP35913 AC126755.1-201ENST00000525846 6405 ntBASIC16.7■□□□□ 0.26
PDE6BP35913 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.7■□□□□ 0.26
PDE6BP35913 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC16.7■□□□□ 0.26
PDE6BP35913 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.7■□□□□ 0.26
PDE6BP35913 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.69■□□□□ 0.26
PDE6BP35913 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 AC011239.2-201ENST00000624820 1489 ntBASIC16.69■□□□□ 0.26
PDE6BP35913 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 ATF4P4-201ENST00000393544 1930 ntBASIC16.69■□□□□ 0.26
PDE6BP35913 AC097359.2-201ENST00000604992 2389 ntBASIC16.69■□□□□ 0.26
PDE6BP35913 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.69■□□□□ 0.26
PDE6BP35913 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PDE6BP35913 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 AC026884.1-201ENST00000418296 457 ntBASIC16.69■□□□□ 0.26
PDE6BP35913 ASLP1-201ENST00000428790 637 ntBASIC16.69■□□□□ 0.26
PDE6BP35913 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC16.69■□□□□ 0.26
PDE6BP35913 AC010395.2-201ENST00000509899 904 ntBASIC16.69■□□□□ 0.26
PDE6BP35913 AC103724.2-201ENST00000520355 476 ntBASIC16.69■□□□□ 0.26
PDE6BP35913 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC16.69■□□□□ 0.26
PDE6BP35913 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC16.69■□□□□ 0.26
PDE6BP35913 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PDE6BP35913 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 AL009178.2-201ENST00000597278 2719 ntBASIC16.69■□□□□ 0.26
PDE6BP35913 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.69■□□□□ 0.26
PDE6BP35913 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC16.69■□□□□ 0.26
PDE6BP35913 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PDE6BP35913 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PDE6BP35913 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6BP35913 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC16.69■□□□□ 0.26
PDE6BP35913 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6BP35913 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6BP35913 PTENP1-202ENST00000532280 3996 ntBASIC16.68■□□□□ 0.26
PDE6BP35913 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6BP35913 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6BP35913 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 SRP9P1-201ENST00000445874 261 ntBASIC16.68■□□□□ 0.26
PDE6BP35913 RPL3P9-201ENST00000463217 1183 ntBASIC16.68■□□□□ 0.26
PDE6BP35913 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6BP35913 RN7SL646P-201ENST00000492969 297 ntBASIC16.68■□□□□ 0.26
PDE6BP35913 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC16.68■□□□□ 0.26
PDE6BP35913 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6BP35913 AC009812.1-201ENST00000605948 1059 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms