RNA–Protein interactions for RNA: ENST00000393544.2

ATF4P4-201, Transcript of activating transcription factor 4 pseudogene 4, humanhuman

BASIC

Gene ATF4P4, Length 1,930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P4-201ENST00000393544 NISCHQ9Y2I1 1504 aa31.53■■■□□ 2.64
ATF4P4-201ENST00000393544 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
ATF4P4-201ENST00000393544 ABCC9O60706 1549 aa27.12■■□□□ 1.93
ATF4P4-201ENST00000393544 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
ATF4P4-201ENST00000393544 NACADO15069 1562 aa26.23■■□□□ 1.79
ATF4P4-201ENST00000393544 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
ATF4P4-201ENST00000393544 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
ATF4P4-201ENST00000393544 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
ATF4P4-201ENST00000393544 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
ATF4P4-201ENST00000393544 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
ATF4P4-201ENST00000393544 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
ATF4P4-201ENST00000393544 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
ATF4P4-201ENST00000393544 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
ATF4P4-201ENST00000393544 SHROOM4Q9ULL8 1493 aa25.16■■□□□ 1.62
ATF4P4-201ENST00000393544 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
ATF4P4-201ENST00000393544 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
ATF4P4-201ENST00000393544 CC2D2AQ9P2K1 1620 aa24.55■■□□□ 1.52
ATF4P4-201ENST00000393544 CECR2Q9BXF3 1484 aa24.52■■□□□ 1.52
ATF4P4-201ENST00000393544 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
ATF4P4-201ENST00000393544 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
ATF4P4-201ENST00000393544 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
ATF4P4-201ENST00000393544 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
ATF4P4-201ENST00000393544 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
ATF4P4-201ENST00000393544 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
ATF4P4-201ENST00000393544 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
ATF4P4-201ENST00000393544 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
ATF4P4-201ENST00000393544 RSF1Q96T23 1441 aaPredicted RBP24.09■■□□□ 1.45
ATF4P4-201ENST00000393544 WIZO95785 1651 aa24.05■■□□□ 1.44
ATF4P4-201ENST00000393544 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
ATF4P4-201ENST00000393544 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
ATF4P4-201ENST00000393544 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
ATF4P4-201ENST00000393544 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
ATF4P4-201ENST00000393544 NESP48681 1621 aa23.53■■□□□ 1.36
ATF4P4-201ENST00000393544 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
ATF4P4-201ENST00000393544 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
ATF4P4-201ENST00000393544 CFTRP13569 1480 aa23.4■■□□□ 1.34
ATF4P4-201ENST00000393544 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
ATF4P4-201ENST00000393544 PDS5BQ9NTI5 1447 aa23.36■■□□□ 1.33
ATF4P4-201ENST00000393544 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
ATF4P4-201ENST00000393544 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
ATF4P4-201ENST00000393544 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
ATF4P4-201ENST00000393544 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
ATF4P4-201ENST00000393544 THOC2Q8NI27 1593 aaKnown RBP23.15■■□□□ 1.3
ATF4P4-201ENST00000393544 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
ATF4P4-201ENST00000393544 CUX2O14529 1486 aa23.05■■□□□ 1.28
ATF4P4-201ENST00000393544 WDR62O43379 1518 aa23.02■■□□□ 1.28
ATF4P4-201ENST00000393544 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
ATF4P4-201ENST00000393544 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
ATF4P4-201ENST00000393544 DNMBPQ6XZF7 1577 aa22.88■■□□□ 1.25
ATF4P4-201ENST00000393544 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
ATF4P4-201ENST00000393544 CUX1P39880 1505 aa22.78■■□□□ 1.24
ATF4P4-201ENST00000393544 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
ATF4P4-201ENST00000393544 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
ATF4P4-201ENST00000393544 IFT140Q96RY7 1462 aa22.68■■□□□ 1.22
ATF4P4-201ENST00000393544 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
ATF4P4-201ENST00000393544 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
ATF4P4-201ENST00000393544 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
ATF4P4-201ENST00000393544 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
ATF4P4-201ENST00000393544 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
ATF4P4-201ENST00000393544 SOGA1O94964 1423 aa22.61■■□□□ 1.21
ATF4P4-201ENST00000393544 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.21
ATF4P4-201ENST00000393544 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
ATF4P4-201ENST00000393544 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
ATF4P4-201ENST00000393544 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
ATF4P4-201ENST00000393544 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
ATF4P4-201ENST00000393544 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.18
ATF4P4-201ENST00000393544 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
ATF4P4-201ENST00000393544 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
ATF4P4-201ENST00000393544 GAPVD1Q14C86 1478 aa22.35■■□□□ 1.17
ATF4P4-201ENST00000393544 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
ATF4P4-201ENST00000393544 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
ATF4P4-201ENST00000393544 PBRM1Q86U86 1689 aa22.31■■□□□ 1.16
ATF4P4-201ENST00000393544 SNAPC4Q5SXM2 1469 aa22.25■■□□□ 1.15
ATF4P4-201ENST00000393544 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
ATF4P4-201ENST00000393544 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
ATF4P4-201ENST00000393544 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
ATF4P4-201ENST00000393544 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
ATF4P4-201ENST00000393544 CHD1O14646 1710 aa22.17■■□□□ 1.14
ATF4P4-201ENST00000393544 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
ATF4P4-201ENST00000393544 FBLN2P98095 1184 aa22.14■■□□□ 1.13
ATF4P4-201ENST00000393544 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
ATF4P4-201ENST00000393544 ADAMTS12P58397 1594 aa22.13■■□□□ 1.13
ATF4P4-201ENST00000393544 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
ATF4P4-201ENST00000393544 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
ATF4P4-201ENST00000393544 IGF1RP08069 1367 aa22.1■■□□□ 1.13
ATF4P4-201ENST00000393544 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
ATF4P4-201ENST00000393544 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
ATF4P4-201ENST00000393544 CUL7Q14999 1698 aa22.06■■□□□ 1.12
ATF4P4-201ENST00000393544 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
ATF4P4-201ENST00000393544 CARMIL1Q5VZK9 1371 aa21.98■■□□□ 1.11
ATF4P4-201ENST00000393544 EEA1Q15075 1411 aa21.95■■□□□ 1.1
ATF4P4-201ENST00000393544 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
ATF4P4-201ENST00000393544 NUP160Q12769 1436 aa21.93■■□□□ 1.1
ATF4P4-201ENST00000393544 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
ATF4P4-201ENST00000393544 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
ATF4P4-201ENST00000393544 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
ATF4P4-201ENST00000393544 PRXQ9BXM0 1461 aa21.85■■□□□ 1.09
ATF4P4-201ENST00000393544 FAM9AQ8IZU1 332 aaPredicted RBP21.82■■□□□ 1.08
ATF4P4-201ENST00000393544 KIAA0586Q9BVV6 1533 aa21.77■■□□□ 1.08
ATF4P4-201ENST00000393544 ARHGEF11O15085 1522 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms