RNA–Protein interactions for RNA: ENST00000484324.1

CPA1-207, Transcript of carboxypeptidase A1, humanhuman

TSL 5 BASIC

Gene CPA1, Length 1,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-207ENST00000484324 NISCHQ9Y2I1 1504 aa31.48■■■□□ 2.63
CPA1-207ENST00000484324 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
CPA1-207ENST00000484324 ABCC9O60706 1549 aa27.84■■■□□ 2.05
CPA1-207ENST00000484324 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
CPA1-207ENST00000484324 NACADO15069 1562 aa26.57■■□□□ 1.84
CPA1-207ENST00000484324 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
CPA1-207ENST00000484324 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
CPA1-207ENST00000484324 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
CPA1-207ENST00000484324 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.77
CPA1-207ENST00000484324 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
CPA1-207ENST00000484324 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
CPA1-207ENST00000484324 BICRAQ9NZM4 1560 aa25.89■■□□□ 1.74
CPA1-207ENST00000484324 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
CPA1-207ENST00000484324 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
CPA1-207ENST00000484324 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
CPA1-207ENST00000484324 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
CPA1-207ENST00000484324 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
CPA1-207ENST00000484324 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
CPA1-207ENST00000484324 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
CPA1-207ENST00000484324 NCAPD3P42695 1498 aa24.49■■□□□ 1.51
CPA1-207ENST00000484324 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
CPA1-207ENST00000484324 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
CPA1-207ENST00000484324 SMARCA2P51531 1590 aa24.43■■□□□ 1.5
CPA1-207ENST00000484324 HMGXB3Q12766 1538 aa24.38■■□□□ 1.49
CPA1-207ENST00000484324 PEG3Q9GZU2 1588 aa24.3■■□□□ 1.48
CPA1-207ENST00000484324 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
CPA1-207ENST00000484324 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
CPA1-207ENST00000484324 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
CPA1-207ENST00000484324 NESP48681 1621 aa23.99■■□□□ 1.43
CPA1-207ENST00000484324 WIZO95785 1651 aa23.99■■□□□ 1.43
CPA1-207ENST00000484324 CUX2O14529 1486 aa23.94■■□□□ 1.42
CPA1-207ENST00000484324 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
CPA1-207ENST00000484324 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
CPA1-207ENST00000484324 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
CPA1-207ENST00000484324 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
CPA1-207ENST00000484324 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
CPA1-207ENST00000484324 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
CPA1-207ENST00000484324 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
CPA1-207ENST00000484324 DNAJC5Q9H3Z4 198 aa23.57■■□□□ 1.36
CPA1-207ENST00000484324 CFTRP13569 1480 aa23.55■■□□□ 1.36
CPA1-207ENST00000484324 MRC2Q9UBG0 1479 aa23.53■■□□□ 1.36
CPA1-207ENST00000484324 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
CPA1-207ENST00000484324 WDR62O43379 1518 aa23.49■■□□□ 1.35
CPA1-207ENST00000484324 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
CPA1-207ENST00000484324 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
CPA1-207ENST00000484324 CCDC88BA6NC98 1476 aa23.4■■□□□ 1.34
CPA1-207ENST00000484324 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
CPA1-207ENST00000484324 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
CPA1-207ENST00000484324 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
CPA1-207ENST00000484324 DNMBPQ6XZF7 1577 aa23.03■■□□□ 1.28
CPA1-207ENST00000484324 IFT140Q96RY7 1462 aa23.02■■□□□ 1.27
CPA1-207ENST00000484324 ZNF608Q9ULD9 1512 aaPredicted RBP22.93■■□□□ 1.26
CPA1-207ENST00000484324 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.26
CPA1-207ENST00000484324 TARBP1Q13395 1621 aaKnown RBP22.88■■□□□ 1.25
CPA1-207ENST00000484324 EIF4G3O43432 1585 aaKnown RBP22.87■■□□□ 1.25
CPA1-207ENST00000484324 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
CPA1-207ENST00000484324 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
CPA1-207ENST00000484324 CUX1P39880 1505 aa22.77■■□□□ 1.24
CPA1-207ENST00000484324 FGD5Q6ZNL6 1462 aa22.74■■□□□ 1.23
CPA1-207ENST00000484324 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
CPA1-207ENST00000484324 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
CPA1-207ENST00000484324 SOGA1O94964 1423 aa22.73■■□□□ 1.23
CPA1-207ENST00000484324 WDR97A6NE52 1622 aa22.7■■□□□ 1.22
CPA1-207ENST00000484324 CHD1O14646 1710 aa22.67■■□□□ 1.22
CPA1-207ENST00000484324 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
CPA1-207ENST00000484324 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
CPA1-207ENST00000484324 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
CPA1-207ENST00000484324 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
CPA1-207ENST00000484324 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
CPA1-207ENST00000484324 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
CPA1-207ENST00000484324 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
CPA1-207ENST00000484324 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
CPA1-207ENST00000484324 MAGI1Q96QZ7 1491 aaPredicted RBP22.52■■□□□ 1.2
CPA1-207ENST00000484324 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
CPA1-207ENST00000484324 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.2
CPA1-207ENST00000484324 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
CPA1-207ENST00000484324 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
CPA1-207ENST00000484324 FBLN2P98095 1184 aa22.5■■□□□ 1.19
CPA1-207ENST00000484324 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
CPA1-207ENST00000484324 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
CPA1-207ENST00000484324 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
CPA1-207ENST00000484324 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
CPA1-207ENST00000484324 SYNJ2O15056 1496 aa22.43■■□□□ 1.18
CPA1-207ENST00000484324 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
CPA1-207ENST00000484324 CLASP1Q7Z460 1538 aa22.39■■□□□ 1.17
CPA1-207ENST00000484324 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
CPA1-207ENST00000484324 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
CPA1-207ENST00000484324 CYB5RLQ6IPT4 315 aa22.26■■□□□ 1.15
CPA1-207ENST00000484324 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
CPA1-207ENST00000484324 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
CPA1-207ENST00000484324 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.15
CPA1-207ENST00000484324 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
CPA1-207ENST00000484324 NUP160Q12769 1436 aa22.16■■□□□ 1.14
CPA1-207ENST00000484324 SHROOM2Q13796 1616 aa22.08■■□□□ 1.12
CPA1-207ENST00000484324 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
CPA1-207ENST00000484324 ERCC6L2Q5T890 1561 aa22.03■■□□□ 1.12
CPA1-207ENST00000484324 CUL7Q14999 1698 aa22.01■■□□□ 1.11
CPA1-207ENST00000484324 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
CPA1-207ENST00000484324 IGF1RP08069 1367 aa21.97■■□□□ 1.11
CPA1-207ENST00000484324 TRHP20396 242 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms