RNA–Protein interactions for RNA: ENST00000463217.2

RPL3P9-201, Transcript of ribosomal protein L3 pseudogene 9, humanhuman

BASIC

Gene RPL3P9, Length 1,183 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P9-201ENST00000463217 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.62
RPL3P9-201ENST00000463217 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
RPL3P9-201ENST00000463217 ABCC9O60706 1549 aa27.6■■■□□ 2.01
RPL3P9-201ENST00000463217 RB1CC1Q8TDY2 1594 aa26.55■■□□□ 1.84
RPL3P9-201ENST00000463217 NACADO15069 1562 aa26.47■■□□□ 1.83
RPL3P9-201ENST00000463217 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
RPL3P9-201ENST00000463217 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
RPL3P9-201ENST00000463217 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
RPL3P9-201ENST00000463217 DCAF1Q9Y4B6 1507 aa26.05■■□□□ 1.76
RPL3P9-201ENST00000463217 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
RPL3P9-201ENST00000463217 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
RPL3P9-201ENST00000463217 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
RPL3P9-201ENST00000463217 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
RPL3P9-201ENST00000463217 DNAJC5BQ9UF47 199 aa25.51■■□□□ 1.67
RPL3P9-201ENST00000463217 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
RPL3P9-201ENST00000463217 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
RPL3P9-201ENST00000463217 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
RPL3P9-201ENST00000463217 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
RPL3P9-201ENST00000463217 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
RPL3P9-201ENST00000463217 NCAPD3P42695 1498 aa24.4■■□□□ 1.5
RPL3P9-201ENST00000463217 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
RPL3P9-201ENST00000463217 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
RPL3P9-201ENST00000463217 ATAD2BQ9ULI0 1458 aa24.34■■□□□ 1.49
RPL3P9-201ENST00000463217 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
RPL3P9-201ENST00000463217 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
RPL3P9-201ENST00000463217 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
RPL3P9-201ENST00000463217 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
RPL3P9-201ENST00000463217 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
RPL3P9-201ENST00000463217 WIZO95785 1651 aa23.86■■□□□ 1.41
RPL3P9-201ENST00000463217 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
RPL3P9-201ENST00000463217 NESP48681 1621 aa23.79■■□□□ 1.4
RPL3P9-201ENST00000463217 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
RPL3P9-201ENST00000463217 CUX2O14529 1486 aa23.77■■□□□ 1.4
RPL3P9-201ENST00000463217 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
RPL3P9-201ENST00000463217 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
RPL3P9-201ENST00000463217 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
RPL3P9-201ENST00000463217 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
RPL3P9-201ENST00000463217 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
RPL3P9-201ENST00000463217 CFTRP13569 1480 aa23.47■■□□□ 1.35
RPL3P9-201ENST00000463217 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
RPL3P9-201ENST00000463217 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
RPL3P9-201ENST00000463217 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
RPL3P9-201ENST00000463217 WDR62O43379 1518 aa23.35■■□□□ 1.33
RPL3P9-201ENST00000463217 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
RPL3P9-201ENST00000463217 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
RPL3P9-201ENST00000463217 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
RPL3P9-201ENST00000463217 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
RPL3P9-201ENST00000463217 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
RPL3P9-201ENST00000463217 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
RPL3P9-201ENST00000463217 DNMBPQ6XZF7 1577 aa22.95■■□□□ 1.26
RPL3P9-201ENST00000463217 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
RPL3P9-201ENST00000463217 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
RPL3P9-201ENST00000463217 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
RPL3P9-201ENST00000463217 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
RPL3P9-201ENST00000463217 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
RPL3P9-201ENST00000463217 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
RPL3P9-201ENST00000463217 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
RPL3P9-201ENST00000463217 CUX1P39880 1505 aa22.67■■□□□ 1.22
RPL3P9-201ENST00000463217 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
RPL3P9-201ENST00000463217 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
RPL3P9-201ENST00000463217 SOGA1O94964 1423 aa22.65■■□□□ 1.22
RPL3P9-201ENST00000463217 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
RPL3P9-201ENST00000463217 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
RPL3P9-201ENST00000463217 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
RPL3P9-201ENST00000463217 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
RPL3P9-201ENST00000463217 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
RPL3P9-201ENST00000463217 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
RPL3P9-201ENST00000463217 CHD1O14646 1710 aa22.45■■□□□ 1.19
RPL3P9-201ENST00000463217 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
RPL3P9-201ENST00000463217 GRIN2BQ13224 1484 aa22.45■■□□□ 1.18
RPL3P9-201ENST00000463217 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
RPL3P9-201ENST00000463217 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
RPL3P9-201ENST00000463217 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
RPL3P9-201ENST00000463217 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
RPL3P9-201ENST00000463217 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
RPL3P9-201ENST00000463217 PBRM1Q86U86 1689 aa22.37■■□□□ 1.17
RPL3P9-201ENST00000463217 FBLN2P98095 1184 aa22.35■■□□□ 1.17
RPL3P9-201ENST00000463217 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
RPL3P9-201ENST00000463217 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.17
RPL3P9-201ENST00000463217 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.17
RPL3P9-201ENST00000463217 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.17
RPL3P9-201ENST00000463217 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
RPL3P9-201ENST00000463217 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
RPL3P9-201ENST00000463217 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
RPL3P9-201ENST00000463217 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
RPL3P9-201ENST00000463217 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
RPL3P9-201ENST00000463217 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
RPL3P9-201ENST00000463217 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
RPL3P9-201ENST00000463217 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
RPL3P9-201ENST00000463217 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
RPL3P9-201ENST00000463217 NUP160Q12769 1436 aa22.07■■□□□ 1.12
RPL3P9-201ENST00000463217 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
RPL3P9-201ENST00000463217 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
RPL3P9-201ENST00000463217 CEP170Q5SW79 1584 aa22.01■■□□□ 1.11
RPL3P9-201ENST00000463217 CUL7Q14999 1698 aa21.96■■□□□ 1.11
RPL3P9-201ENST00000463217 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
RPL3P9-201ENST00000463217 IGF1RP08069 1367 aa21.94■■□□□ 1.1
RPL3P9-201ENST00000463217 RUSC2Q8N2Y8 1516 aa21.86■■□□□ 1.09
RPL3P9-201ENST00000463217 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
RPL3P9-201ENST00000463217 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms