Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBQLN4Q9NRR5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
UBQLN4Q9NRR5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UBQLN4Q9NRR5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
UBQLN4Q9NRR5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN4Q9NRR5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 AC241377.3-202ENST00000626088 1088 ntBASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 AC241585.3-202ENST00000628937 1088 ntBASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 AC245100.8-202ENST00000629247 1058 ntBASIC20.5■□□□□ 0.87
UBQLN4Q9NRR5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.49■□□□□ 0.87
UBQLN4Q9NRR5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 AL512631.2-201ENST00000604634 923 ntBASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN4Q9NRR5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 SRD5A1P1-201ENST00000442297 786 ntBASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN4Q9NRR5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN4Q9NRR5 C9orf163-202ENST00000624034 2573 ntBASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 AC009086.3-201ENST00000623486 1008 ntBASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN4Q9NRR5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN4Q9NRR5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN4Q9NRR5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN4Q9NRR5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN4Q9NRR5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.44■□□□□ 0.86
UBQLN4Q9NRR5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.44■□□□□ 0.86
UBQLN4Q9NRR5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN4Q9NRR5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN4Q9NRR5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms