Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9N2K0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Q9N2K0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.66■□□□□ 0.58
Q9N2K0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q9N2K0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Q9N2K0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.65■□□□□ 0.58
Q9N2K0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.65■□□□□ 0.58
Q9N2K0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.65■□□□□ 0.58
Q9N2K0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Q9N2K0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q9N2K0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Q9N2K0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Q9N2K0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 SNX5-217ENST00000606557 1087 ntBASIC18.64■□□□□ 0.57
Q9N2K0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.64■□□□□ 0.57
Q9N2K0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Q9N2K0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Q9N2K0 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.64■□□□□ 0.57
Q9N2K0 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.64■□□□□ 0.57
Q9N2K0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9N2K0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.64■□□□□ 0.57
Q9N2K0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9N2K0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9N2K0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
Q9N2K0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.63■□□□□ 0.57
Q9N2K0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.63■□□□□ 0.57
Q9N2K0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Q9N2K0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.63■□□□□ 0.57
Q9N2K0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9N2K0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Q9N2K0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.62■□□□□ 0.57
Q9N2K0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.62■□□□□ 0.57
Q9N2K0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.62■□□□□ 0.57
Q9N2K0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9N2K0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9N2K0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9N2K0 AC144652.1-201ENST00000609974 1624 ntBASIC18.61■□□□□ 0.57
Q9N2K0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Q9N2K0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Q9N2K0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9N2K0 AC103834.1-201ENST00000520383 144 ntBASIC18.61■□□□□ 0.57
Q9N2K0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Q9N2K0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.61■□□□□ 0.57
Q9N2K0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Q9N2K0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9N2K0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.61■□□□□ 0.57
Q9N2K0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Q9N2K0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.6■□□□□ 0.57
Q9N2K0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.6■□□□□ 0.57
Q9N2K0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Q9N2K0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.6■□□□□ 0.57
Q9N2K0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.6■□□□□ 0.57
Q9N2K0 AC012354.3-201ENST00000623734 483 ntBASIC18.6■□□□□ 0.57
Q9N2K0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Q9N2K0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9N2K0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms