Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RANBP3Q9H6Z4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RANBP3Q9H6Z4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.28■□□□□ 0.68
RANBP3Q9H6Z4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.28■□□□□ 0.68
RANBP3Q9H6Z4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 ANOS2P-203ENST00000472227 1816 ntBASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RANBP3Q9H6Z4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.27■□□□□ 0.67
RANBP3Q9H6Z4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.27■□□□□ 0.67
RANBP3Q9H6Z4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RANBP3Q9H6Z4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RANBP3Q9H6Z4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RANBP3Q9H6Z4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RANBP3Q9H6Z4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RANBP3Q9H6Z4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 AC010980.1-201ENST00000587192 1142 ntBASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RANBP3Q9H6Z4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 MIR6089-201ENST00000616698 64 ntBASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RANBP3Q9H6Z4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 YBX1P4-201ENST00000392794 808 ntBASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RANBP3Q9H6Z4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 AC092068.2-201ENST00000590491 1708 ntBASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RANBP3Q9H6Z4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RANBP3Q9H6Z4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RANBP3Q9H6Z4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RANBP3Q9H6Z4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RANBP3Q9H6Z4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RANBP3Q9H6Z4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms