Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A6AQ9H2W1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
MS4A6AQ9H2W1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.08■□□□□ 0.33
MS4A6AQ9H2W1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MS4A6AQ9H2W1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.08■□□□□ 0.33
MS4A6AQ9H2W1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 AC005703.6-201ENST00000623265 1329 ntBASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 AC010997.5-201ENST00000609182 354 ntBASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MS4A6AQ9H2W1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.07■□□□□ 0.32
MS4A6AQ9H2W1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MS4A6AQ9H2W1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 UNC93B8-201ENST00000511903 705 ntBASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MS4A6AQ9H2W1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A6AQ9H2W1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.03■□□□□ 0.32
MS4A6AQ9H2W1 GUSBP5-201ENST00000418136 578 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms