Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HACD3Q9P035 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HACD3Q9P035 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HACD3Q9P035 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.02□□□□□ -0.16
HACD3Q9P035 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HACD3Q9P035 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HACD3Q9P035 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HACD3Q9P035 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.02□□□□□ -0.16
HACD3Q9P035 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HACD3Q9P035 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HACD3Q9P035 DLX4-206ENST00000611342 1662 ntBASIC14.02□□□□□ -0.16
HACD3Q9P035 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HACD3Q9P035 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.02□□□□□ -0.16
HACD3Q9P035 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
HACD3Q9P035 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.02□□□□□ -0.17
HACD3Q9P035 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 SLC25A24P2-201ENST00000415059 510 ntBASIC14.02□□□□□ -0.17
HACD3Q9P035 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 AL592076.1-201ENST00000424448 303 ntBASIC14.02□□□□□ -0.17
HACD3Q9P035 RPL8P2-201ENST00000430538 502 ntBASIC14.02□□□□□ -0.17
HACD3Q9P035 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.02□□□□□ -0.17
HACD3Q9P035 AC007279.1-201ENST00000448547 837 ntBASIC14.02□□□□□ -0.17
HACD3Q9P035 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.02□□□□□ -0.17
HACD3Q9P035 RN7SL788P-201ENST00000460504 316 ntBASIC14.02□□□□□ -0.17
HACD3Q9P035 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.02□□□□□ -0.17
HACD3Q9P035 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.02□□□□□ -0.17
HACD3Q9P035 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HACD3Q9P035 AF254983.2-201ENST00000612331 135 ntBASIC14.02□□□□□ -0.17
HACD3Q9P035 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 MIR497HG-202ENST00000572453 3838 ntBASIC14.02□□□□□ -0.17
HACD3Q9P035 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HACD3Q9P035 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HACD3Q9P035 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.02□□□□□ -0.17
HACD3Q9P035 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HACD3Q9P035 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HACD3Q9P035 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 AL359845.1-201ENST00000458202 1648 ntBASIC14.01□□□□□ -0.17
HACD3Q9P035 POM121L14P-201ENST00000406100 1558 ntBASIC14.01□□□□□ -0.17
HACD3Q9P035 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.01□□□□□ -0.17
HACD3Q9P035 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HACD3Q9P035 AC138761.6-201ENST00000583997 1423 ntBASIC14.01□□□□□ -0.17
HACD3Q9P035 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
HACD3Q9P035 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.01□□□□□ -0.17
HACD3Q9P035 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.01□□□□□ -0.17
HACD3Q9P035 RN7SL720P-201ENST00000488178 304 ntBASIC14.01□□□□□ -0.17
HACD3Q9P035 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.01□□□□□ -0.17
HACD3Q9P035 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.01□□□□□ -0.17
HACD3Q9P035 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.01□□□□□ -0.17
HACD3Q9P035 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.01□□□□□ -0.17
HACD3Q9P035 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.01□□□□□ -0.17
HACD3Q9P035 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HACD3Q9P035 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HACD3Q9P035 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HACD3Q9P035 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HACD3Q9P035 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.01□□□□□ -0.17
HACD3Q9P035 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 AC083964.2-201ENST00000623988 2396 ntBASIC14.01□□□□□ -0.17
HACD3Q9P035 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HACD3Q9P035 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HACD3Q9P035 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HACD3Q9P035 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HACD3Q9P035 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14□□□□□ -0.17
HACD3Q9P035 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms