Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 AC022497.1-201ENST00000624916 3691 ntBASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 PGAM1P5-201ENST00000548011 764 ntBASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 AL031719.1-201ENST00000623365 2587 ntBASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CFAP61Q8NHU2 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 LAP3P2-201ENST00000454686 1454 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AC006033.1-201ENST00000440505 426 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AP001258.2-201ENST00000529891 490 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AC013355.1-201ENST00000562625 723 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 SNORD3B-2-202ENST00000571722 791 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AC104506.1-201ENST00000609247 429 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 MIR6799-201ENST00000620297 69 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 AC018445.4-201ENST00000624066 2291 ntBASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CFAP61Q8NHU2 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CFAP61Q8NHU2 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms