Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CHRNA5P30532 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CHRNA5P30532 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA5P30532 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA5P30532 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.58■□□□□ 0.24
CHRNA5P30532 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CHRNA5P30532 SPTLC1P3-201ENST00000403408 259 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRNA5P30532 AC007881.1-201ENST00000437460 187 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 AC010677.1-201ENST00000441690 412 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 AL137077.1-201ENST00000442115 528 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CHRNA5P30532 RN7SL477P-201ENST00000488440 286 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 FTH1-205ENST00000529631 507 ntTSL 4 BASIC16.58■□□□□ 0.24
CHRNA5P30532 GOLGA2P10-201ENST00000550961 817 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC16.58■□□□□ 0.24
CHRNA5P30532 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC16.58■□□□□ 0.24
CHRNA5P30532 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRNA5P30532 AC239600.1-201ENST00000603201 462 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 AC090950.1-202ENST00000605733 644 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 AC079331.1-201ENST00000623200 1200 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 AC117500.5-201ENST00000623233 527 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA5P30532 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
CHRNA5P30532 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC16.58■□□□□ 0.24
CHRNA5P30532 TBC1D3P1-201ENST00000590047 1693 ntBASIC16.58■□□□□ 0.24
CHRNA5P30532 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA5P30532 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRNA5P30532 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA5P30532 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CHRNA5P30532 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CHRNA5P30532 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA5P30532 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHRNA5P30532 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA5P30532 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CHRNA5P30532 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CHRNA5P30532 OR2T32P-201ENST00000403423 963 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.57■□□□□ 0.24
CHRNA5P30532 CLK2P1-201ENST00000416636 1294 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC16.57■□□□□ 0.24
CHRNA5P30532 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 RN7SL87P-201ENST00000497657 288 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC16.57■□□□□ 0.24
CHRNA5P30532 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 AC104759.1-201ENST00000559109 939 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 AC131274.3-201ENST00000578745 1271 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 AC009779.7-201ENST00000609031 469 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 AC127002.1-201ENST00000619123 455 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 AC073592.10-201ENST00000624789 597 ntBASIC16.57■□□□□ 0.24
CHRNA5P30532 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHRNA5P30532 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA5P30532 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.56■□□□□ 0.24
CHRNA5P30532 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 AL157832.2-205ENST00000597245 1649 ntBASIC16.56■□□□□ 0.24
CHRNA5P30532 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC16.56■□□□□ 0.24
CHRNA5P30532 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHRNA5P30532 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC16.56■□□□□ 0.24
CHRNA5P30532 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA5P30532 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CHRNA5P30532 TEDDM2P-201ENST00000414169 786 ntBASIC16.56■□□□□ 0.24
CHRNA5P30532 AC012513.2-201ENST00000441511 1137 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms