Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 ACTG1P19-201ENST00000418987 1116 ntBASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 RPL35P9-201ENST00000446059 350 ntBASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 CR383656.3-201ENST00000551315 183 ntBASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 AC011491.1-203ENST00000637688 543 ntBASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC5Q9UQL6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
HDAC5Q9UQL6 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 GUCY2EP-203ENST00000531117 1918 ntBASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 VENTXP3-201ENST00000546480 773 ntBASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 NPM1P43-201ENST00000558669 786 ntBASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC17.26■□□□□ 0.35
HDAC5Q9UQL6 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 AC079250.1-201ENST00000456046 531 ntBASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 RPS2P36-201ENST00000456516 831 ntBASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 MIR4649-201ENST00000582839 64 ntBASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC5Q9UQL6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms