Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.08□□□□□ -0.31
CCDC187A0A096LP49 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC187A0A096LP49 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
CCDC187A0A096LP49 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC187A0A096LP49 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC187A0A096LP49 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 GUCY2EP-203ENST00000531117 1918 ntBASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 AC138969.2-201ENST00000532739 9932 ntBASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 EEF1DP5-201ENST00000431410 772 ntBASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 AC120498.7-201ENST00000562876 330 ntBASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 AC026120.2-201ENST00000617239 309 ntBASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC187A0A096LP49 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 ZNF877P-201ENST00000437614 612 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 RPL29P2-201ENST00000488409 460 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 AC079414.2-201ENST00000567157 1104 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 MED11-202ENST00000573708 802 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 MIR4746-201ENST00000579802 71 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 RN7SL524P-201ENST00000581152 300 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 PHF23-213ENST00000613632 850 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 ST20-AS1-201ENST00000560255 4223 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms