Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AL137784.3-201ENST00000623858 2288 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 MIR645-201ENST00000385283 94 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AC136604.1-202ENST00000425471 771 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AC008723.1-201ENST00000506922 207 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AC114947.1-202ENST00000514136 344 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 KRT8P18-201ENST00000413425 1445 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 AL133338.1-201ENST00000565695 1517 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 PCDHA6-201ENST00000378126 3267 ntBASIC13.02□□□□□ -0.32
NUP43Q8NFH3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.02□□□□□ -0.32
NUP43Q8NFH3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AC005722.1-201ENST00000431878 964 ntBASIC13.02□□□□□ -0.33
NUP43Q8NFH3 Z97180.1-201ENST00000445173 988 ntBASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AC006335.1-201ENST00000445200 547 ntBASIC13.02□□□□□ -0.33
NUP43Q8NFH3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AC099548.2-209ENST00000480264 625 ntBASIC13.02□□□□□ -0.33
NUP43Q8NFH3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 STRCP1-201ENST00000509801 5328 ntBASIC13.02□□□□□ -0.33
NUP43Q8NFH3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 MKRN5P-201ENST00000445263 1467 ntBASIC13.02□□□□□ -0.33
NUP43Q8NFH3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 NRADDP-202ENST00000641269 1585 ntBASIC13.02□□□□□ -0.33
NUP43Q8NFH3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms