Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 FAM197Y6-201ENST00000420524 766 ntBASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 AC053503.3-201ENST00000448375 114 ntBASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 AC095040.1-201ENST00000513286 675 ntBASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 AC005777.1-201ENST00000588332 187 ntBASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 RPS18P9-201ENST00000482817 460 ntBASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RP1L1Q8IWN7 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
RP1L1Q8IWN7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.65□□□□□ -0.39
RP1L1Q8IWN7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.65□□□□□ -0.39
RP1L1Q8IWN7 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.39
RP1L1Q8IWN7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 KRT18P46-201ENST00000435568 1279 ntBASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 ABHD17AP9-201ENST00000561925 548 ntBASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AC139713.2-207ENST00000641556 1292 ntBASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 PDXDC2P-206ENST00000534700 1315 ntBASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AC092570.1-201ENST00000414446 469 ntBASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 RN7SKP155-201ENST00000516031 288 ntBASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.64□□□□□ -0.39
RP1L1Q8IWN7 MIR4746-201ENST00000579802 71 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms