Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.77□□□□□ -0.53
SSBP1Q04837 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 AC091271.1-201ENST00000611877 1162 ntBASIC11.77□□□□□ -0.53
SSBP1Q04837 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC11.77□□□□□ -0.53
SSBP1Q04837 AL591163.1-201ENST00000641757 987 ntBASIC11.77□□□□□ -0.53
SSBP1Q04837 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SSBP1Q04837 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 AC009549.1-201ENST00000603468 1686 ntBASIC11.77□□□□□ -0.53
SSBP1Q04837 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
SSBP1Q04837 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP1Q04837 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 AC008764.8-201ENST00000623966 2717 ntBASIC11.76□□□□□ -0.53
SSBP1Q04837 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SSBP1Q04837 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.76□□□□□ -0.53
SSBP1Q04837 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.76□□□□□ -0.53
SSBP1Q04837 HLA-V-201ENST00000429037 534 ntBASIC11.76□□□□□ -0.53
SSBP1Q04837 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.76□□□□□ -0.53
SSBP1Q04837 ELK1P1-201ENST00000485699 580 ntBASIC11.76□□□□□ -0.53
SSBP1Q04837 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.76□□□□□ -0.53
SSBP1Q04837 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
SSBP1Q04837 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 AC009884.2-201ENST00000603110 324 ntBASIC11.76□□□□□ -0.53
SSBP1Q04837 AC009118.2-201ENST00000613275 655 ntBASIC11.76□□□□□ -0.53
SSBP1Q04837 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.76□□□□□ -0.53
SSBP1Q04837 LINC02228-202ENST00000641261 2489 ntBASIC11.76□□□□□ -0.53
SSBP1Q04837 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP1Q04837 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP1Q04837 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
SSBP1Q04837 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms