RNA–Protein interactions for RNA: ENST00000263335.11

PAX8-202, Transcript of paired box 8, humanhuman

TSL 1 (best) BASIC

Gene PAX8, Length 3,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-202ENST00000263335 NISCHQ9Y2I1 1504 aa25.13■■□□□ 1.61
PAX8-202ENST00000263335 SHROOM4Q9ULL8 1493 aa22.61■■□□□ 1.21
PAX8-202ENST00000263335 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
PAX8-202ENST00000263335 HRCP23327 699 aa21.98■■□□□ 1.11
PAX8-202ENST00000263335 PCGF6Q9BYE7 350 aa21.92■■□□□ 1.1
PAX8-202ENST00000263335 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
PAX8-202ENST00000263335 CHIC1Q5VXU3 224 aa21.73■■□□□ 1.07
PAX8-202ENST00000263335 MYO15BQ96JP2 1530 aa21.72■■□□□ 1.07
PAX8-202ENST00000263335 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
PAX8-202ENST00000263335 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
PAX8-202ENST00000263335 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
PAX8-202ENST00000263335 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
PAX8-202ENST00000263335 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
PAX8-202ENST00000263335 DCAF1Q9Y4B6 1507 aa21■□□□□ 0.95
PAX8-202ENST00000263335 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
PAX8-202ENST00000263335 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
PAX8-202ENST00000263335 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
PAX8-202ENST00000263335 ZEB1P37275 1124 aaPredicted RBP20.71■□□□□ 0.91
PAX8-202ENST00000263335 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
PAX8-202ENST00000263335 PELP1Q8IZL8 1130 aaKnown RBP20.66■□□□□ 0.9
PAX8-202ENST00000263335 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
PAX8-202ENST00000263335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.42■□□□□ 0.86
PAX8-202ENST00000263335 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
PAX8-202ENST00000263335 NEUROD1Q13562 356 aa20.3■□□□□ 0.84
PAX8-202ENST00000263335 ACIN1Q9UKV3 1341 aaKnown RBP20.26■□□□□ 0.83
PAX8-202ENST00000263335 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
PAX8-202ENST00000263335 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
PAX8-202ENST00000263335 DIEXFQ68CQ4 756 aaKnown RBP20.15■□□□□ 0.82
PAX8-202ENST00000263335 ABCC9O60706 1549 aa20.15■□□□□ 0.82
PAX8-202ENST00000263335 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.82
PAX8-202ENST00000263335 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
PAX8-202ENST00000263335 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
PAX8-202ENST00000263335 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
PAX8-202ENST00000263335 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
PAX8-202ENST00000263335 ZNF316A6NFI3 1004 aaPredicted RBP19.75■□□□□ 0.75
PAX8-202ENST00000263335 UBTFP17480 764 aaKnown RBP19.73■□□□□ 0.75
PAX8-202ENST00000263335 MROH2BQ7Z745 1585 aa19.72■□□□□ 0.75
PAX8-202ENST00000263335 MYT1Q01538 1121 aa19.7■□□□□ 0.74
PAX8-202ENST00000263335 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
PAX8-202ENST00000263335 MIER1Q8N108 512 aa19.68■□□□□ 0.74
PAX8-202ENST00000263335 RANGAP1P46060 587 aaPredicted RBP19.66■□□□□ 0.74
PAX8-202ENST00000263335 WIZO95785 1651 aa19.63■□□□□ 0.73
PAX8-202ENST00000263335 CEP162Q5TB80 1403 aa19.6■□□□□ 0.73
PAX8-202ENST00000263335 ABCC8Q09428 1581 aa19.54■□□□□ 0.72
PAX8-202ENST00000263335 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
PAX8-202ENST00000263335 SOGA1O94964 1423 aa19.52■□□□□ 0.71
PAX8-202ENST00000263335 CSRNP3Q8WYN3 585 aa19.48■□□□□ 0.71
PAX8-202ENST00000263335 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
PAX8-202ENST00000263335 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
PAX8-202ENST00000263335 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
PAX8-202ENST00000263335 APLP2Q06481 763 aa19.36■□□□□ 0.69
PAX8-202ENST00000263335 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
PAX8-202ENST00000263335 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
PAX8-202ENST00000263335 NACADO15069 1562 aa19.24■□□□□ 0.67
PAX8-202ENST00000263335 GOLGA3Q08378 1498 aa19.2■□□□□ 0.66
PAX8-202ENST00000263335 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
PAX8-202ENST00000263335 BCANQ96GW7 911 aa19.19■□□□□ 0.66
PAX8-202ENST00000263335 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
PAX8-202ENST00000263335 CLIP1P30622 1438 aa19.15■□□□□ 0.66
PAX8-202ENST00000263335 TOP2AP11388 1531 aaKnown RBP19.13■□□□□ 0.65
PAX8-202ENST00000263335 EEA1Q15075 1411 aa19.13■□□□□ 0.65
PAX8-202ENST00000263335 SMARCA2P51531 1590 aa19.11■□□□□ 0.65
PAX8-202ENST00000263335 ITGAEP38570 1179 aa19.1■□□□□ 0.65
PAX8-202ENST00000263335 TSHZ2Q9NRE2 1034 aa19.03■□□□□ 0.64
PAX8-202ENST00000263335 KCNH8Q96L42 1107 aa19.03■□□□□ 0.64
PAX8-202ENST00000263335 VPS8Q8N3P4 1428 aa19.01■□□□□ 0.63
PAX8-202ENST00000263335 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
PAX8-202ENST00000263335 SMARCA4P51532 1647 aa18.99■□□□□ 0.63
PAX8-202ENST00000263335 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
PAX8-202ENST00000263335 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
PAX8-202ENST00000263335 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
PAX8-202ENST00000263335 ANP32EQ9BTT0 268 aa18.92■□□□□ 0.62
PAX8-202ENST00000263335 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
PAX8-202ENST00000263335 FKBP8Q14318 412 aa18.89■□□□□ 0.61
PAX8-202ENST00000263335 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
PAX8-202ENST00000263335 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
PAX8-202ENST00000263335 KIF21BO75037 1637 aa18.82■□□□□ 0.6
PAX8-202ENST00000263335 HIRIP3Q9BW71 556 aaPredicted RBP18.82■□□□□ 0.6
PAX8-202ENST00000263335 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
PAX8-202ENST00000263335 ERICH6Q7L0X2 663 aa18.74■□□□□ 0.59
PAX8-202ENST00000263335 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
PAX8-202ENST00000263335 NEFLP07196 543 aa18.74■□□□□ 0.59
PAX8-202ENST00000263335 ATP1B4Q9UN42 357 aaPredicted RBP18.72■□□□□ 0.59
PAX8-202ENST00000263335 SIN3AQ96ST3 1273 aa18.71■□□□□ 0.59
PAX8-202ENST00000263335 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.58
PAX8-202ENST00000263335 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
PAX8-202ENST00000263335 RBM19Q9Y4C8 960 aaKnown RBP18.65■□□□□ 0.58
PAX8-202ENST00000263335 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
PAX8-202ENST00000263335 FAM50AQ14320 339 aaKnown RBP18.65■□□□□ 0.58
PAX8-202ENST00000263335 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
PAX8-202ENST00000263335 RAB3GAP2Q9H2M9 1393 aa18.62■□□□□ 0.57
PAX8-202ENST00000263335 IRX6P78412 446 aaPredicted RBP18.57■□□□□ 0.56
PAX8-202ENST00000263335 ANP32CO43423 234 aa18.56■□□□□ 0.56
PAX8-202ENST00000263335 UNC13AQ9UPW8 1703 aa18.55■□□□□ 0.56
PAX8-202ENST00000263335 RRBP1Q9P2E9 1410 aaKnown RBP18.55■□□□□ 0.56
PAX8-202ENST00000263335 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
PAX8-202ENST00000263335 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
PAX8-202ENST00000263335 PRXQ9BXM0 1461 aa18.47■□□□□ 0.55
PAX8-202ENST00000263335 PPP1R15AO75807 674 aaPredicted RBP18.47■□□□□ 0.55
PAX8-202ENST00000263335 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms