RNA–Protein interactions for RNA: ENST00000392069.6

PAX3-205, Transcript of paired box 3, humanhuman

TSL 5 BASIC

Gene PAX3, Length 3,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-205ENST00000392069 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
PAX3-205ENST00000392069 CCDC180Q9P1Z9 1646 aa24.08■■□□□ 1.45
PAX3-205ENST00000392069 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
PAX3-205ENST00000392069 ZCCHC6Q5VYS8 1495 aaKnown RBP23.88■■□□□ 1.41
PAX3-205ENST00000392069 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
PAX3-205ENST00000392069 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
PAX3-205ENST00000392069 DCAF1Q9Y4B6 1507 aa23.14■■□□□ 1.29
PAX3-205ENST00000392069 ABCC9O60706 1549 aa22.83■■□□□ 1.25
PAX3-205ENST00000392069 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.22
PAX3-205ENST00000392069 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
PAX3-205ENST00000392069 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
PAX3-205ENST00000392069 NACADO15069 1562 aa22.33■■□□□ 1.17
PAX3-205ENST00000392069 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
PAX3-205ENST00000392069 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
PAX3-205ENST00000392069 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
PAX3-205ENST00000392069 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
PAX3-205ENST00000392069 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
PAX3-205ENST00000392069 WIZO95785 1651 aa21.9■■□□□ 1.1
PAX3-205ENST00000392069 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
PAX3-205ENST00000392069 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
PAX3-205ENST00000392069 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
PAX3-205ENST00000392069 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
PAX3-205ENST00000392069 HRCP23327 699 aa21.68■■□□□ 1.06
PAX3-205ENST00000392069 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
PAX3-205ENST00000392069 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
PAX3-205ENST00000392069 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
PAX3-205ENST00000392069 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
PAX3-205ENST00000392069 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
PAX3-205ENST00000392069 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
PAX3-205ENST00000392069 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
PAX3-205ENST00000392069 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
PAX3-205ENST00000392069 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
PAX3-205ENST00000392069 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
PAX3-205ENST00000392069 TRIM26Q12899 539 aaPredicted RBP21.37■■□□□ 1.01
PAX3-205ENST00000392069 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
PAX3-205ENST00000392069 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
PAX3-205ENST00000392069 SOGA1O94964 1423 aa21.09■□□□□ 0.97
PAX3-205ENST00000392069 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
PAX3-205ENST00000392069 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
PAX3-205ENST00000392069 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
PAX3-205ENST00000392069 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
PAX3-205ENST00000392069 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
PAX3-205ENST00000392069 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
PAX3-205ENST00000392069 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
PAX3-205ENST00000392069 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
PAX3-205ENST00000392069 EEA1Q15075 1411 aa20.8■□□□□ 0.92
PAX3-205ENST00000392069 TTBK1Q5TCY1 1321 aaPredicted RBP20.75■□□□□ 0.91
PAX3-205ENST00000392069 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
PAX3-205ENST00000392069 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
PAX3-205ENST00000392069 ZEB1P37275 1124 aaPredicted RBP20.71■□□□□ 0.91
PAX3-205ENST00000392069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
PAX3-205ENST00000392069 KIF21BO75037 1637 aa20.63■□□□□ 0.89
PAX3-205ENST00000392069 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
PAX3-205ENST00000392069 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
PAX3-205ENST00000392069 HMGXB3Q12766 1538 aa20.61■□□□□ 0.89
PAX3-205ENST00000392069 CEP164Q9UPV0 1460 aa20.61■□□□□ 0.89
PAX3-205ENST00000392069 CC2D2AQ9P2K1 1620 aa20.58■□□□□ 0.89
PAX3-205ENST00000392069 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.88
PAX3-205ENST00000392069 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
PAX3-205ENST00000392069 CUX1P39880 1505 aa20.49■□□□□ 0.87
PAX3-205ENST00000392069 CLIP1P30622 1438 aa20.49■□□□□ 0.87
PAX3-205ENST00000392069 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
PAX3-205ENST00000392069 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
PAX3-205ENST00000392069 CFTRP13569 1480 aa20.43■□□□□ 0.86
PAX3-205ENST00000392069 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
PAX3-205ENST00000392069 PRXQ9BXM0 1461 aa20.36■□□□□ 0.85
PAX3-205ENST00000392069 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
PAX3-205ENST00000392069 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
PAX3-205ENST00000392069 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
PAX3-205ENST00000392069 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
PAX3-205ENST00000392069 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
PAX3-205ENST00000392069 CADPSQ9ULU8 1353 aa20.2■□□□□ 0.83
PAX3-205ENST00000392069 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
PAX3-205ENST00000392069 CUX2O14529 1486 aa20.13■□□□□ 0.81
PAX3-205ENST00000392069 APLP2Q06481 763 aa20.13■□□□□ 0.81
PAX3-205ENST00000392069 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
PAX3-205ENST00000392069 FGD5Q6ZNL6 1462 aa20.12■□□□□ 0.81
PAX3-205ENST00000392069 IGF1RP08069 1367 aa20.1■□□□□ 0.81
PAX3-205ENST00000392069 ARHGAP35Q9NRY4 1499 aa20.09■□□□□ 0.81
PAX3-205ENST00000392069 NESP48681 1621 aa20.06■□□□□ 0.8
PAX3-205ENST00000392069 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
PAX3-205ENST00000392069 DIEXFQ68CQ4 756 aaKnown RBP19.99■□□□□ 0.79
PAX3-205ENST00000392069 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
PAX3-205ENST00000392069 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
PAX3-205ENST00000392069 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
PAX3-205ENST00000392069 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
PAX3-205ENST00000392069 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
PAX3-205ENST00000392069 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
PAX3-205ENST00000392069 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
PAX3-205ENST00000392069 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.78
PAX3-205ENST00000392069 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
PAX3-205ENST00000392069 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
PAX3-205ENST00000392069 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
PAX3-205ENST00000392069 TIAM1Q13009 1591 aa19.82■□□□□ 0.76
PAX3-205ENST00000392069 P3H3Q8IVL6 736 aa19.82■□□□□ 0.76
PAX3-205ENST00000392069 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
PAX3-205ENST00000392069 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
PAX3-205ENST00000392069 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
PAX3-205ENST00000392069 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
PAX3-205ENST00000392069 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms