Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 MIR611-201ENST00000384869 67 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN5P54829 MTCYBP15-201ENST00000433123 1127 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 STK24P1-201ENST00000455035 1291 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN5P54829 RN7SL173P-201ENST00000461853 292 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 RN7SL147P-201ENST00000487345 298 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.44□□□□□ -0.1
PTPN5P54829 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN5P54829 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN5P54829 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 AC120498.5-201ENST00000561757 299 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 AC140658.4-201ENST00000561990 352 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 INO80E-209ENST00000567254 625 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN5P54829 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN5P54829 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN5P54829 CSTP2-201ENST00000610599 398 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN5P54829 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN5P54829 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
PTPN5P54829 AC026748.1-201ENST00000624349 3251 ntBASIC14.44□□□□□ -0.1
PTPN5P54829 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PTPN5P54829 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN5P54829 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN5P54829 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PTPN5P54829 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN5P54829 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
PTPN5P54829 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN5P54829 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN5P54829 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN5P54829 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 TUBB8P4-201ENST00000511806 1324 ntBASIC14.43□□□□□ -0.1
PTPN5P54829 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
PTPN5P54829 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.43□□□□□ -0.1
PTPN5P54829 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 HNRNPA1P25-201ENST00000422644 937 ntBASIC14.43□□□□□ -0.1
PTPN5P54829 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.43□□□□□ -0.1
PTPN5P54829 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC14.43□□□□□ -0.1
PTPN5P54829 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 AC006116.2-201ENST00000589958 988 ntBASIC14.43□□□□□ -0.1
PTPN5P54829 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.43□□□□□ -0.1
PTPN5P54829 AC017076.1-201ENST00000607613 578 ntBASIC14.43□□□□□ -0.1
PTPN5P54829 OR3A1-202ENST00000615105 966 ntBASIC14.43□□□□□ -0.1
PTPN5P54829 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC14.43□□□□□ -0.1
PTPN5P54829 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.43□□□□□ -0.1
PTPN5P54829 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
PTPN5P54829 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PTPN5P54829 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.43□□□□□ -0.1
PTPN5P54829 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PTPN5P54829 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PTPN5P54829 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN5P54829 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN5P54829 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN5P54829 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PTPN5P54829 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.42□□□□□ -0.1
PTPN5P54829 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN5P54829 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN5P54829 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN5P54829 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.42□□□□□ -0.1
PTPN5P54829 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms