RNA–Protein interactions for RNA: ENST00000627399.3

LINC01125-249, humanhuman

APPRIS P5 TSL 5 BASIC

Gene LINC01125, Length 1,067 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01125-249ENST00000627399 AEBP2Q6ZN18 517 aaPredicted RBP35.42■■■■□ 3.26
LINC01125-249ENST00000627399 CHIC1Q5VXU3 224 aa33.6■■■□□ 2.97
LINC01125-249ENST00000627399 SENP3Q9H4L4 574 aaPredicted RBP30■■■□□ 2.39
LINC01125-249ENST00000627399 PHF23Q9BUL5 403 aaPredicted RBP29.72■■■□□ 2.35
LINC01125-249ENST00000627399 FOXD1Q16676 465 aa28.09■■■□□ 2.09
LINC01125-249ENST00000627399 PLPPR3Q6T4P5 718 aa26.81■■□□□ 1.88
LINC01125-249ENST00000627399 PPP6R1Q9UPN7 881 aa26.41■■□□□ 1.82
LINC01125-249ENST00000627399 ADRA2BP18089 450 aa26.28■■□□□ 1.8
LINC01125-249ENST00000627399 PIAS4Q8N2W9 510 aaPredicted RBP26.19■■□□□ 1.78
LINC01125-249ENST00000627399 MSH5O43196 834 aa26.09■■□□□ 1.77
LINC01125-249ENST00000627399 POTEDQ86YR6 584 aa25.47■■□□□ 1.67
LINC01125-249ENST00000627399 MAPK8IP2Q13387 824 aaPredicted RBP24.16■■□□□ 1.46
LINC01125-249ENST00000627399 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
LINC01125-249ENST00000627399 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
LINC01125-249ENST00000627399 PPP4R3CPQ6ZMV5 832 aa23.58■■□□□ 1.37
LINC01125-249ENST00000627399 CNKSR2Q8WXI2 1034 aa23.06■■□□□ 1.28
LINC01125-249ENST00000627399 HOXD11P31277 338 aaPredicted RBP23.03■■□□□ 1.28
LINC01125-249ENST00000627399 DCAF8L1A6NGE4 600 aa22.84■■□□□ 1.25
LINC01125-249ENST00000627399 RNF216Q9NWF9 866 aaPredicted RBP22.84■■□□□ 1.25
LINC01125-249ENST00000627399 NCBP3Q53F19 620 aaKnown RBP22.56■■□□□ 1.2
LINC01125-249ENST00000627399 NPM3O75607 178 aaKnown RBP22.4■■□□□ 1.18
LINC01125-249ENST00000627399 CACNB1Q02641 598 aaPredicted RBP22.38■■□□□ 1.17
LINC01125-249ENST00000627399 RNF39Q9H2S5 420 aa22.37■■□□□ 1.17
LINC01125-249ENST00000627399 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
LINC01125-249ENST00000627399 KCNA4P22459 653 aa22.08■■□□□ 1.13
LINC01125-249ENST00000627399 C1QBPQ07021 282 aaKnown RBP21.97■■□□□ 1.11
LINC01125-249ENST00000627399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.09
LINC01125-249ENST00000627399 U3KPZ7 1027 aaPredicted RBP21.53■■□□□ 1.04
LINC01125-249ENST00000627399 SLC4A2P04920 1241 aa21.43■■□□□ 1.02
LINC01125-249ENST00000627399 SPINK5Q9NQ38 1064 aaPredicted RBP21.23■□□□□ 0.99
LINC01125-249ENST00000627399 CAPN15O75808 1086 aa21.07■□□□□ 0.96
LINC01125-249ENST00000627399 DSG3P32926 999 aa20.99■□□□□ 0.95
LINC01125-249ENST00000627399 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
LINC01125-249ENST00000627399 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.92
LINC01125-249ENST00000627399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
LINC01125-249ENST00000627399 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
LINC01125-249ENST00000627399 APLP2Q06481 763 aa20.68■□□□□ 0.9
LINC01125-249ENST00000627399 SAMD1Q6SPF0 538 aaPredicted RBP20.68■□□□□ 0.9
LINC01125-249ENST00000627399 ABCB7O75027 752 aa20.66■□□□□ 0.9
LINC01125-249ENST00000627399 ZNF219Q9P2Y4 722 aaPredicted RBP20.65■□□□□ 0.9
LINC01125-249ENST00000627399 MYCNP04198 464 aaPredicted RBP20.62■□□□□ 0.89
LINC01125-249ENST00000627399 FOXD4L1Q9NU39 408 aa20.47■□□□□ 0.87
LINC01125-249ENST00000627399 ZBTB22O15209 634 aa20.38■□□□□ 0.85
LINC01125-249ENST00000627399 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.85
LINC01125-249ENST00000627399 POLA2Q14181 598 aa20.26■□□□□ 0.83
LINC01125-249ENST00000627399 POTEHQ6S545 545 aa19.93■□□□□ 0.78
LINC01125-249ENST00000627399 RBM42Q9BTD8 480 aaKnown RBP19.87■□□□□ 0.77
LINC01125-249ENST00000627399 ATXN8OSP0DMR3 200 aa19.79■□□□□ 0.76
LINC01125-249ENST00000627399 ZBTB12Q9Y330 459 aaPredicted RBP19.69■□□□□ 0.74
LINC01125-249ENST00000627399 OSCARQ8IYS5 282 aa19.62■□□□□ 0.73
LINC01125-249ENST00000627399 CHRDL2Q6WN34 429 aa19.51■□□□□ 0.71
LINC01125-249ENST00000627399 AKT1S1Q96B36 256 aa19.5■□□□□ 0.71
LINC01125-249ENST00000627399 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
LINC01125-249ENST00000627399 REM2Q8IYK8 340 aaPredicted RBP19.38■□□□□ 0.69
LINC01125-249ENST00000627399 MKRN4PQ13434 485 aaPredicted RBP19.37■□□□□ 0.69
LINC01125-249ENST00000627399 FBLN2P98095 1184 aa19.28■□□□□ 0.68
LINC01125-249ENST00000627399 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
LINC01125-249ENST00000627399 PITPNM1O00562 1244 aa19.19■□□□□ 0.66
LINC01125-249ENST00000627399 SPDYE2BA6NHP3 402 aa19.17■□□□□ 0.66
LINC01125-249ENST00000627399 SPDYE6P0CI01 402 aa19.17■□□□□ 0.66
LINC01125-249ENST00000627399 SPDYE2Q495Y8 402 aa19.17■□□□□ 0.66
LINC01125-249ENST00000627399 PIP4P2Q8N4L2 257 aa19.11■□□□□ 0.65
LINC01125-249ENST00000627399 FXR2P51116 673 aaKnown RBP eCLIP19■□□□□ 0.63
LINC01125-249ENST00000627399 SSUH2Q9Y2M2 353 aa19■□□□□ 0.63
LINC01125-249ENST00000627399 ZNF692Q9BU19 519 aaPredicted RBP18.99■□□□□ 0.63
LINC01125-249ENST00000627399 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
LINC01125-249ENST00000627399 SPDYE1Q8NFV5 336 aaPredicted RBP18.79■□□□□ 0.6
LINC01125-249ENST00000627399 PABPN1Q86U42 306 aaKnown RBP eCLIP18.74■□□□□ 0.59
LINC01125-249ENST00000627399 SP7Q8TDD2 431 aaPredicted RBP18.71■□□□□ 0.59
LINC01125-249ENST00000627399 HAX1O00165 279 aa18.68■□□□□ 0.58
LINC01125-249ENST00000627399 PRKAR2AP13861 404 aaKnown RBP18.66■□□□□ 0.58
LINC01125-249ENST00000627399 EVX2Q03828 476 aa18.63■□□□□ 0.57
LINC01125-249ENST00000627399 CHADLQ6NUI6 762 aa18.55■□□□□ 0.56
LINC01125-249ENST00000627399 PRR29P0C7W0 189 aa18.5■□□□□ 0.55
LINC01125-249ENST00000627399 C19orf67A6NJJ6 358 aa18.39■□□□□ 0.53
LINC01125-249ENST00000627399 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
LINC01125-249ENST00000627399 FARP1Q9Y4F1 1045 aaPredicted RBP18.21■□□□□ 0.51
LINC01125-249ENST00000627399 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
LINC01125-249ENST00000627399 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
LINC01125-249ENST00000627399 GABBR2O75899 941 aa18.11■□□□□ 0.49
LINC01125-249ENST00000627399 CD44P16070 742 aaKnown RBP18.06■□□□□ 0.48
LINC01125-249ENST00000627399 PROM2Q8N271 834 aa18.01■□□□□ 0.47
LINC01125-249ENST00000627399 MNX1P50219 401 aaPredicted RBP17.9■□□□□ 0.46
LINC01125-249ENST00000627399 ZRANB1Q9UGI0 708 aa17.82■□□□□ 0.44
LINC01125-249ENST00000627399 POTEIP0CG38 1075 aa17.81■□□□□ 0.44
LINC01125-249ENST00000627399 ZNF579Q8NAF0 562 aaKnown RBP17.78■□□□□ 0.44
LINC01125-249ENST00000627399 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC01125-249ENST00000627399 CLCN6P51797 869 aa17.66■□□□□ 0.42
LINC01125-249ENST00000627399 GALR2O43603 387 aaPredicted RBP17.64■□□□□ 0.41
LINC01125-249ENST00000627399 PHF12Q96QT6 1004 aa17.64■□□□□ 0.41
LINC01125-249ENST00000627399 FKBP8Q14318 412 aa17.57■□□□□ 0.4
LINC01125-249ENST00000627399 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
LINC01125-249ENST00000627399 LHX8Q68G74 356 aa17.56■□□□□ 0.4
LINC01125-249ENST00000627399 DCBLD2Q96PD2 775 aa17.53■□□□□ 0.4
LINC01125-249ENST00000627399 MIER1Q8N108 512 aa17.51■□□□□ 0.39
LINC01125-249ENST00000627399 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.39
LINC01125-249ENST00000627399 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
LINC01125-249ENST00000627399 MS4A3Q96HJ5 214 aa17.39■□□□□ 0.37
LINC01125-249ENST00000627399 RASEFQ8IZ41 740 aa17.38■□□□□ 0.37
LINC01125-249ENST00000627399 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms