RNA–Protein interactions for RNA: ENST00000461853.3

RN7SL173P-201, Transcript of RNA, 7SL, cytoplasmic 173, pseudogene, humanhuman

BASIC

Gene RN7SL173P, Length 292 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL173P-201ENST00000461853 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
RN7SL173P-201ENST00000461853 ABCC9O60706 1549 aa29.1■■■□□ 2.25
RN7SL173P-201ENST00000461853 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
RN7SL173P-201ENST00000461853 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
RN7SL173P-201ENST00000461853 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
RN7SL173P-201ENST00000461853 NACADO15069 1562 aa27.27■■□□□ 1.96
RN7SL173P-201ENST00000461853 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
RN7SL173P-201ENST00000461853 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
RN7SL173P-201ENST00000461853 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
RN7SL173P-201ENST00000461853 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
RN7SL173P-201ENST00000461853 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
RN7SL173P-201ENST00000461853 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
RN7SL173P-201ENST00000461853 DCAF1Q9Y4B6 1507 aa26.3■■□□□ 1.8
RN7SL173P-201ENST00000461853 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
RN7SL173P-201ENST00000461853 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
RN7SL173P-201ENST00000461853 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
RN7SL173P-201ENST00000461853 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
RN7SL173P-201ENST00000461853 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
RN7SL173P-201ENST00000461853 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
RN7SL173P-201ENST00000461853 CUX2O14529 1486 aa25.33■■□□□ 1.65
RN7SL173P-201ENST00000461853 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
RN7SL173P-201ENST00000461853 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
RN7SL173P-201ENST00000461853 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
RN7SL173P-201ENST00000461853 HMGXB3Q12766 1538 aa24.97■■□□□ 1.59
RN7SL173P-201ENST00000461853 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
RN7SL173P-201ENST00000461853 NESP48681 1621 aa24.9■■□□□ 1.58
RN7SL173P-201ENST00000461853 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
RN7SL173P-201ENST00000461853 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
RN7SL173P-201ENST00000461853 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
RN7SL173P-201ENST00000461853 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
RN7SL173P-201ENST00000461853 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
RN7SL173P-201ENST00000461853 LAMC3Q9Y6N6 1575 aa24.68■■□□□ 1.54
RN7SL173P-201ENST00000461853 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
RN7SL173P-201ENST00000461853 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
RN7SL173P-201ENST00000461853 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
RN7SL173P-201ENST00000461853 CADPSQ9ULU8 1353 aa24.39■■□□□ 1.49
RN7SL173P-201ENST00000461853 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
RN7SL173P-201ENST00000461853 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
RN7SL173P-201ENST00000461853 WDR62O43379 1518 aa24.35■■□□□ 1.49
RN7SL173P-201ENST00000461853 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
RN7SL173P-201ENST00000461853 WIZO95785 1651 aa24.14■■□□□ 1.45
RN7SL173P-201ENST00000461853 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
RN7SL173P-201ENST00000461853 CFTRP13569 1480 aa24.04■■□□□ 1.44
RN7SL173P-201ENST00000461853 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
RN7SL173P-201ENST00000461853 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
RN7SL173P-201ENST00000461853 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
RN7SL173P-201ENST00000461853 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.4
RN7SL173P-201ENST00000461853 RIMBP3CA6NJZ7 1639 aa23.8■■□□□ 1.4
RN7SL173P-201ENST00000461853 RIMBP3BA6NNM3 1639 aa23.8■■□□□ 1.4
RN7SL173P-201ENST00000461853 RIMBP3Q9UFD9 1639 aa23.8■■□□□ 1.4
RN7SL173P-201ENST00000461853 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
RN7SL173P-201ENST00000461853 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
RN7SL173P-201ENST00000461853 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
RN7SL173P-201ENST00000461853 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
RN7SL173P-201ENST00000461853 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
RN7SL173P-201ENST00000461853 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
RN7SL173P-201ENST00000461853 EIF4G3O43432 1585 aaKnown RBP23.55■■□□□ 1.36
RN7SL173P-201ENST00000461853 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
RN7SL173P-201ENST00000461853 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
RN7SL173P-201ENST00000461853 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
RN7SL173P-201ENST00000461853 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
RN7SL173P-201ENST00000461853 CHD1O14646 1710 aa23.44■■□□□ 1.34
RN7SL173P-201ENST00000461853 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
RN7SL173P-201ENST00000461853 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.34
RN7SL173P-201ENST00000461853 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
RN7SL173P-201ENST00000461853 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
RN7SL173P-201ENST00000461853 FBLN2P98095 1184 aa23.25■■□□□ 1.31
RN7SL173P-201ENST00000461853 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
RN7SL173P-201ENST00000461853 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
RN7SL173P-201ENST00000461853 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
RN7SL173P-201ENST00000461853 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
RN7SL173P-201ENST00000461853 SOGA1O94964 1423 aa23.18■■□□□ 1.3
RN7SL173P-201ENST00000461853 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
RN7SL173P-201ENST00000461853 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
RN7SL173P-201ENST00000461853 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
RN7SL173P-201ENST00000461853 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
RN7SL173P-201ENST00000461853 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
RN7SL173P-201ENST00000461853 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
RN7SL173P-201ENST00000461853 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
RN7SL173P-201ENST00000461853 CUX1P39880 1505 aa23.03■■□□□ 1.28
RN7SL173P-201ENST00000461853 GAPVD1Q14C86 1478 aa22.96■■□□□ 1.27
RN7SL173P-201ENST00000461853 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
RN7SL173P-201ENST00000461853 PBRM1Q86U86 1689 aa22.91■■□□□ 1.26
RN7SL173P-201ENST00000461853 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
RN7SL173P-201ENST00000461853 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
RN7SL173P-201ENST00000461853 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
RN7SL173P-201ENST00000461853 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
RN7SL173P-201ENST00000461853 NUP160Q12769 1436 aa22.74■■□□□ 1.23
RN7SL173P-201ENST00000461853 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
RN7SL173P-201ENST00000461853 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
RN7SL173P-201ENST00000461853 SHROOM2Q13796 1616 aa22.69■■□□□ 1.22
RN7SL173P-201ENST00000461853 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.21
RN7SL173P-201ENST00000461853 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
RN7SL173P-201ENST00000461853 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
RN7SL173P-201ENST00000461853 BIVM-ERCC5R4GMW8 1640 aa22.56■■□□□ 1.2
RN7SL173P-201ENST00000461853 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
RN7SL173P-201ENST00000461853 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
RN7SL173P-201ENST00000461853 PRG4Q92954 1404 aaPredicted RBP22.49■■□□□ 1.19
RN7SL173P-201ENST00000461853 ABCC10Q5T3U5 1492 aa22.45■■□□□ 1.18
RN7SL173P-201ENST00000461853 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms