Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR3147-201ENST00000577811 66 ntBASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 NUDT4P2-201ENST00000578341 546 ntBASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC092171.5-201ENST00000608012 942 ntBASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC073352.2-201ENST00000609385 439 ntBASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 TCAM1P-207ENST00000485295 1537 ntBASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 PYY2-201ENST00000315776 282 ntBASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC130709.1-201ENST00000484779 1212 ntBASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 MRPL22P1-201ENST00000505398 616 ntBASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC135983.4-201ENST00000564116 1262 ntBASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC152010.1-201ENST00000415779 2006 ntBASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 AC004554.1-201ENST00000422830 1468 ntBASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM48Q8IWZ4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM48Q8IWZ4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms