Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 GHET1-201ENST00000627071 1906 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CICP1-201ENST00000416803 2410 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 PCDHB19P-202ENST00000625133 2914 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 TMBIM7P-202ENST00000641474 1516 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AC012441.2-201ENST00000444843 739 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 MIR4783-201ENST00000580343 82 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AC021016.3-201ENST00000608367 477 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AL162426.1-201ENST00000624141 743 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 RCC2P1-201ENST00000452257 1476 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 LAP3P2-201ENST00000454686 1454 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 SALL4P6-201ENST00000429385 1691 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 AL008718.2-201ENST00000609206 1313 ntBASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RTN4IP1Q8WWV3 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AC102953.2-201ENST00000609755 3026 ntBASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms