Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCA3PQ9Y6N3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CLCA3PQ9Y6N3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCA3PQ9Y6N3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.08■□□□□ 0.96
CLCA3PQ9Y6N3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA3PQ9Y6N3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCA3PQ9Y6N3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLCA3PQ9Y6N3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCA3PQ9Y6N3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCA3PQ9Y6N3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCA3PQ9Y6N3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCA3PQ9Y6N3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCA3PQ9Y6N3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 AC068473.5-201ENST00000616428 2072 ntBASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA3PQ9Y6N3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA3PQ9Y6N3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 C17orf82-201ENST00000623772 1530 ntBASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA3PQ9Y6N3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA3PQ9Y6N3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.02■□□□□ 0.96
CLCA3PQ9Y6N3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA3PQ9Y6N3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA3PQ9Y6N3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA3PQ9Y6N3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA3PQ9Y6N3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA3PQ9Y6N3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA3PQ9Y6N3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLCA3PQ9Y6N3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLCA3PQ9Y6N3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 AC092171.4-201ENST00000609130 632 ntBASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 AC079834.2-201ENST00000609776 1949 ntBASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA3PQ9Y6N3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLCA3PQ9Y6N3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCA3PQ9Y6N3 AC241377.3-202ENST00000626088 1088 ntBASIC21■□□□□ 0.95
CLCA3PQ9Y6N3 AC241585.3-202ENST00000628937 1088 ntBASIC21■□□□□ 0.95
CLCA3PQ9Y6N3 AC245100.8-202ENST00000629247 1058 ntBASIC21■□□□□ 0.95
CLCA3PQ9Y6N3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLCA3PQ9Y6N3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLCA3PQ9Y6N3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21■□□□□ 0.95
CLCA3PQ9Y6N3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms