Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.07□□□□□ -0.169e-6■■■■■ 32.4
XRN2Q9H0D6 SOD2-214ENST00000545162 571 ntTSL 314.06□□□□□ -0.169e-6■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-202ENST00000612728 1981 ntTSL 1 (best)14.02□□□□□ -0.179e-6■■■■■ 32.4
XRN2Q9H0D6 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC14□□□□□ -0.179e-6■■■■■ 32.4
XRN2Q9H0D6 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.189e-6■■■■■ 32.4
XRN2Q9H0D6 DHX37-203ENST00000539298 4550 ntTSL 1 (best)13.84□□□□□ -0.199e-6■■■■■ 32.4
XRN2Q9H0D6 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.29e-6■■■■■ 32.4
XRN2Q9H0D6 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.215e-6■■■■■ 32.4
XRN2Q9H0D6 ABCF3-210ENST00000473311 2844 ntTSL 513.68□□□□□ -0.229e-6■■■■■ 32.4
XRN2Q9H0D6 TECPR1-217ENST00000490842 3488 ntTSL 1 (best)13.65□□□□□ -0.229e-6■■■■■ 32.4
XRN2Q9H0D6 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.63□□□□□ -0.239e-6■■■■■ 32.4
XRN2Q9H0D6 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.249e-6■■■■■ 32.4
XRN2Q9H0D6 THOC7-204ENST00000469584 836 ntTSL 2 BASIC13.49□□□□□ -0.254e-7■■■■■ 32.4
XRN2Q9H0D6 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.46□□□□□ -0.269e-6■■■■■ 32.4
XRN2Q9H0D6 CANT1-207ENST00000588611 900 ntTSL 313.42□□□□□ -0.269e-6■■■■■ 32.4
XRN2Q9H0D6 ABTB1-205ENST00000467179 691 ntTSL 313.39□□□□□ -0.279e-6■■■■■ 32.4
XRN2Q9H0D6 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.276e-10■■■■■ 32.4
XRN2Q9H0D6 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.279e-6■■■■■ 32.4
XRN2Q9H0D6 TXNDC5-205ENST00000475802 582 ntTSL 213.34□□□□□ -0.279e-6■■■■■ 32.4
XRN2Q9H0D6 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.289e-6■■■■■ 32.4
XRN2Q9H0D6 QTRT1-211ENST00000592376 500 ntTSL 313.27□□□□□ -0.291e-10■■■■■ 32.4
XRN2Q9H0D6 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC13.2□□□□□ -0.39e-6■■■■■ 32.4
XRN2Q9H0D6 ABCC6-203ENST00000574094 2260 ntTSL 513.17□□□□□ -0.39e-6■■■■■ 32.4
XRN2Q9H0D6 SRP14-205ENST00000559081 578 ntTSL 2 BASIC13.13□□□□□ -0.319e-6■■■■■ 32.4
XRN2Q9H0D6 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.321e-6■■■■■ 32.4
XRN2Q9H0D6 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC13.05□□□□□ -0.321e-10■■■■■ 32.4
XRN2Q9H0D6 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC13.01□□□□□ -0.339e-6■■■■■ 32.4
XRN2Q9H0D6 NAMPT-206ENST00000441045 589 ntTSL 412.96□□□□□ -0.333e-7■■■■■ 32.4
XRN2Q9H0D6 SHKBP1-206ENST00000595523 575 ntTSL 412.93□□□□□ -0.349e-6■■■■■ 32.4
XRN2Q9H0D6 RECQL5-205ENST00000443199 3089 ntTSL 1 (best)12.84□□□□□ -0.359e-6■■■■■ 32.4
XRN2Q9H0D6 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.369e-6■■■■■ 32.4
XRN2Q9H0D6 DMXL1-209ENST00000510924 530 ntTSL 512.82□□□□□ -0.369e-6■■■■■ 32.4
XRN2Q9H0D6 FAM157C-203ENST00000568070 480 ntTSL 312.8□□□□□ -0.369e-6■■■■■ 32.4
XRN2Q9H0D6 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.78□□□□□ -0.369e-6■■■■■ 32.4
XRN2Q9H0D6 ABTB1-213ENST00000491633 471 ntTSL 312.7□□□□□ -0.389e-6■■■■■ 32.4
XRN2Q9H0D6 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.385e-6■■■■■ 32.4
XRN2Q9H0D6 GGA1-219ENST00000481613 647 ntTSL 212.67□□□□□ -0.389e-6■■■■■ 32.4
XRN2Q9H0D6 ARL16-212ENST00000576914 548 ntTSL 312.66□□□□□ -0.389e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.49e-6■■■■■ 32.4
XRN2Q9H0D6 LINC00959-201ENST00000456581 2843 ntTSL 212.48□□□□□ -0.419e-6■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-206ENST00000619446 819 ntTSL 312.46□□□□□ -0.419e-6■■■■■ 32.4
XRN2Q9H0D6 FKBP11-210ENST00000551694 2661 ntTSL 212.44□□□□□ -0.429e-6■■■■■ 32.4
XRN2Q9H0D6 IK-211ENST00000610522 737 ntTSL 5 BASIC12.41□□□□□ -0.429e-6■■■■■ 32.4
XRN2Q9H0D6 PRKAA1-208ENST00000511248 668 ntTSL 212.38□□□□□ -0.431e-10■■■■■ 32.4
XRN2Q9H0D6 SP2-203ENST00000635868 342 ntTSL 512.33□□□□□ -0.449e-6■■■■■ 32.4
XRN2Q9H0D6 ANK3-220ENST00000510382 1226 ntTSL 212.23□□□□□ -0.459e-6■■■■■ 32.4
XRN2Q9H0D6 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC12.15□□□□□ -0.469e-6■■■■■ 32.4
XRN2Q9H0D6 SOD2-203ENST00000367055 990 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.469e-6■■■■■ 32.4
XRN2Q9H0D6 SOD2-210ENST00000537657 507 ntTSL 212.15□□□□□ -0.469e-6■■■■■ 32.4
XRN2Q9H0D6 JMJD4-205ENST00000485807 3749 ntTSL 212.14□□□□□ -0.479e-6■■■■■ 32.4
XRN2Q9H0D6 MAP2K1-203ENST00000566326 1432 ntTSL 5 BASIC12.13□□□□□ -0.479e-6■■■■■ 32.4
XRN2Q9H0D6 SP2-205ENST00000637943 481 ntTSL 211.98□□□□□ -0.499e-6■■■■■ 32.4
XRN2Q9H0D6 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.493e-7■■■■■ 32.4
XRN2Q9H0D6 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC11.95□□□□□ -0.59e-6■■■■■ 32.4
XRN2Q9H0D6 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.59e-6■■■■■ 32.4
XRN2Q9H0D6 ATF3-209ENST00000492118 2103 ntTSL 211.89□□□□□ -0.519e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-223ENST00000324771 4148 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.519e-6■■■■■ 32.4
XRN2Q9H0D6 STX12-203ENST00000468761 703 ntTSL 211.88□□□□□ -0.519e-6■■■■■ 32.4
XRN2Q9H0D6 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.519e-6■■■■■ 32.4
XRN2Q9H0D6 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.549e-6■■■■■ 32.4
XRN2Q9H0D6 GRPEL1-201ENST00000264954 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.549e-6■■■■■ 32.4
XRN2Q9H0D6 SPPL3-202ENST00000392495 2265 ntTSL 211.66□□□□□ -0.549e-6■■■■■ 32.4
XRN2Q9H0D6 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.559e-6■■■■■ 32.4
XRN2Q9H0D6 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.61□□□□□ -0.555e-6■■■■■ 32.4
XRN2Q9H0D6 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.555e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-227ENST00000376570 3820 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.559e-6■■■■■ 32.4
XRN2Q9H0D6 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.569e-6■■■■■ 32.4
XRN2Q9H0D6 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.565e-6■■■■■ 32.4
XRN2Q9H0D6 TFPI-207ENST00000421427 804 ntTSL 311.49□□□□□ -0.571e-10■■■■■ 32.4
XRN2Q9H0D6 UPF1-213ENST00000601981 556 ntTSL 511.46□□□□□ -0.579e-6■■■■■ 32.4
XRN2Q9H0D6 NHP2-203ENST00000502263 552 ntTSL 211.44□□□□□ -0.589e-6■■■■■ 32.4
XRN2Q9H0D6 LEMD1-211ENST00000629624 576 ntTSL 411.44□□□□□ -0.589e-6■■■■■ 32.4
XRN2Q9H0D6 DMXL1-203ENST00000503802 1835 ntTSL 1 (best)11.44□□□□□ -0.589e-6■■■■■ 32.4
XRN2Q9H0D6 ATXN7L3-202ENST00000454077 3523 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.589e-6■■■■■ 32.4
XRN2Q9H0D6 C16orf70-207ENST00000569277 519 ntTSL 311.41□□□□□ -0.589e-6■■■■■ 32.4
XRN2Q9H0D6 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.595e-6■■■■■ 32.4
XRN2Q9H0D6 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.595e-6■■■■■ 32.4
XRN2Q9H0D6 ATF3-211ENST00000613954 2031 ntTSL 5 BASIC11.35□□□□□ -0.591e-7■■■■■ 32.4
XRN2Q9H0D6 STRIP1-205ENST00000485775 3363 ntTSL 1 (best)11.33□□□□□ -0.65e-6■■■■■ 32.4
XRN2Q9H0D6 NAMPT-213ENST00000491027 1009 ntTSL 211.32□□□□□ -0.63e-7■■■■■ 32.4
XRN2Q9H0D6 DHX37-206ENST00000544745 4112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.69e-6■■■■■ 32.4
XRN2Q9H0D6 WDR20-218ENST00000559478 422 ntTSL 211.28□□□□□ -0.69e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-212ENST00000509064 569 ntTSL 411.15□□□□□ -0.629e-6■■■■■ 32.4
XRN2Q9H0D6 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.639e-6■■■■■ 32.4
XRN2Q9H0D6 PPM1A-205ENST00000528241 564 ntTSL 511.09□□□□□ -0.631e-6■■■■■ 32.4
XRN2Q9H0D6 AP1S3-201ENST00000334271 2201 ntTSL 211.09□□□□□ -0.639e-6■■■■■ 32.4
XRN2Q9H0D6 WDR37-202ENST00000358220 4582 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.639e-6■■■■■ 32.4
XRN2Q9H0D6 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.645e-6■■■■■ 32.4
XRN2Q9H0D6 DNAJC3-201ENST00000376795 2273 ntTSL 5 BASIC11.01□□□□□ -0.656e-10■■■■■ 32.4
XRN2Q9H0D6 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.659e-6■■■■■ 32.4
XRN2Q9H0D6 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.659e-6■■■■■ 32.4
XRN2Q9H0D6 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.669e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-240ENST00000454612 3942 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.669e-6■■■■■ 32.4
XRN2Q9H0D6 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.669e-6■■■■■ 32.4
XRN2Q9H0D6 FAM157C-204ENST00000570230 2184 ntTSL 5 BASIC10.87□□□□□ -0.679e-6■■■■■ 32.4
XRN2Q9H0D6 ADAM17-201ENST00000310823 4349 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.679e-6■■■■■ 32.4
XRN2Q9H0D6 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC10.84□□□□□ -0.671e-6■■■■■ 32.4
XRN2Q9H0D6 CPT1A-206ENST00000540367 2496 ntTSL 1 (best) BASIC10.8□□□□□ -0.689e-6■■■■■ 32.4
XRN2Q9H0D6 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.681e-6■■■■■ 32.4
XRN2Q9H0D6 RASSF4-204ENST00000462822 354 ntTSL 310.78□□□□□ -0.689e-6■■■■■ 32.4
Retrieved 100 of 21,068 protein–RNA pairs in 601.4 ms