RNA–Protein interactions for RNA: ENST00000392495.7

SPPL3-202, Transcript of signal peptide peptidase like 3, humanhuman

TSL 2

Gene SPPL3, Length 2,265 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-202ENST00000392495 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
SPPL3-202ENST00000392495 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
SPPL3-202ENST00000392495 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
SPPL3-202ENST00000392495 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
SPPL3-202ENST00000392495 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
SPPL3-202ENST00000392495 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.85
SPPL3-202ENST00000392495 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
SPPL3-202ENST00000392495 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
SPPL3-202ENST00000392495 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
SPPL3-202ENST00000392495 ABCC9O60706 1549 aa19.68■□□□□ 0.74
SPPL3-202ENST00000392495 SCRIBQ14160 1630 aa19.64■□□□□ 0.74
SPPL3-202ENST00000392495 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
SPPL3-202ENST00000392495 NACADO15069 1562 aa19.4■□□□□ 0.7
SPPL3-202ENST00000392495 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
SPPL3-202ENST00000392495 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
SPPL3-202ENST00000392495 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
SPPL3-202ENST00000392495 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
SPPL3-202ENST00000392495 HRCP23327 699 aa19.22■□□□□ 0.67
SPPL3-202ENST00000392495 MROH2BQ7Z745 1585 aa19.18■□□□□ 0.66
SPPL3-202ENST00000392495 WIZO95785 1651 aa19.08■□□□□ 0.65
SPPL3-202ENST00000392495 TRIM41Q8WV44 630 aa19.08■□□□□ 0.64
SPPL3-202ENST00000392495 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
SPPL3-202ENST00000392495 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
SPPL3-202ENST00000392495 UNC13AQ9UPW8 1703 aa18.9■□□□□ 0.62
SPPL3-202ENST00000392495 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
SPPL3-202ENST00000392495 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
SPPL3-202ENST00000392495 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
SPPL3-202ENST00000392495 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
SPPL3-202ENST00000392495 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
SPPL3-202ENST00000392495 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
SPPL3-202ENST00000392495 CCDC88BA6NC98 1476 aa18.68■□□□□ 0.58
SPPL3-202ENST00000392495 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
SPPL3-202ENST00000392495 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.57
SPPL3-202ENST00000392495 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
SPPL3-202ENST00000392495 PABPN1Q86U42 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
SPPL3-202ENST00000392495 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
SPPL3-202ENST00000392495 SOGA1O94964 1423 aa18.43■□□□□ 0.54
SPPL3-202ENST00000392495 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
SPPL3-202ENST00000392495 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
SPPL3-202ENST00000392495 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
SPPL3-202ENST00000392495 CEP162Q5TB80 1403 aa18.3■□□□□ 0.52
SPPL3-202ENST00000392495 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
SPPL3-202ENST00000392495 EEA1Q15075 1411 aa18.29■□□□□ 0.52
SPPL3-202ENST00000392495 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
SPPL3-202ENST00000392495 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
SPPL3-202ENST00000392495 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
SPPL3-202ENST00000392495 BAZ1BQ9UIG0 1483 aaKnown RBP18.23■□□□□ 0.51
SPPL3-202ENST00000392495 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
SPPL3-202ENST00000392495 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
SPPL3-202ENST00000392495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.49
SPPL3-202ENST00000392495 TTBK1Q5TCY1 1321 aaPredicted RBP18.11■□□□□ 0.49
SPPL3-202ENST00000392495 KIF21BO75037 1637 aa18.09■□□□□ 0.49
SPPL3-202ENST00000392495 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
SPPL3-202ENST00000392495 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
SPPL3-202ENST00000392495 TOP2BQ02880 1626 aa18.02■□□□□ 0.47
SPPL3-202ENST00000392495 RAPGEF2Q9Y4G8 1499 aa17.98■□□□□ 0.47
SPPL3-202ENST00000392495 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
SPPL3-202ENST00000392495 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
SPPL3-202ENST00000392495 BIVM-ERCC5R4GMW8 1640 aa17.96■□□□□ 0.47
SPPL3-202ENST00000392495 CLIP1P30622 1438 aa17.96■□□□□ 0.47
SPPL3-202ENST00000392495 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.45
SPPL3-202ENST00000392495 CUX1P39880 1505 aa17.85■□□□□ 0.45
SPPL3-202ENST00000392495 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
SPPL3-202ENST00000392495 CFTRP13569 1480 aa17.82■□□□□ 0.44
SPPL3-202ENST00000392495 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
SPPL3-202ENST00000392495 RANGAP1P46060 587 aaPredicted RBP17.79■□□□□ 0.44
SPPL3-202ENST00000392495 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
SPPL3-202ENST00000392495 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
SPPL3-202ENST00000392495 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
SPPL3-202ENST00000392495 KIF27Q86VH2 1401 aa17.71■□□□□ 0.43
SPPL3-202ENST00000392495 APLP2Q06481 763 aa17.7■□□□□ 0.42
SPPL3-202ENST00000392495 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
SPPL3-202ENST00000392495 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
SPPL3-202ENST00000392495 KANK4Q5T7N3 995 aaPredicted RBP17.6■□□□□ 0.41
SPPL3-202ENST00000392495 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
SPPL3-202ENST00000392495 ARHGAP35Q9NRY4 1499 aa17.58■□□□□ 0.4
SPPL3-202ENST00000392495 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
SPPL3-202ENST00000392495 IGF1RP08069 1367 aa17.55■□□□□ 0.4
SPPL3-202ENST00000392495 CUX2O14529 1486 aa17.55■□□□□ 0.4
SPPL3-202ENST00000392495 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
SPPL3-202ENST00000392495 NEUROD1Q13562 356 aa17.52■□□□□ 0.4
SPPL3-202ENST00000392495 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.39
SPPL3-202ENST00000392495 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
SPPL3-202ENST00000392495 RRBP1Q9P2E9 1410 aaKnown RBP17.49■□□□□ 0.39
SPPL3-202ENST00000392495 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
SPPL3-202ENST00000392495 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
SPPL3-202ENST00000392495 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
SPPL3-202ENST00000392495 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
SPPL3-202ENST00000392495 CCNB3Q8WWL7 1395 aa17.38■□□□□ 0.37
SPPL3-202ENST00000392495 TIAM1Q13009 1591 aa17.37■□□□□ 0.37
SPPL3-202ENST00000392495 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
SPPL3-202ENST00000392495 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
SPPL3-202ENST00000392495 MAP3K1Q13233 1512 aa17.35■□□□□ 0.37
SPPL3-202ENST00000392495 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
SPPL3-202ENST00000392495 NESP48681 1621 aa17.35■□□□□ 0.37
SPPL3-202ENST00000392495 MIER1Q8N108 512 aa17.35■□□□□ 0.37
SPPL3-202ENST00000392495 TOPBP1Q92547 1522 aa17.33■□□□□ 0.36
SPPL3-202ENST00000392495 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
SPPL3-202ENST00000392495 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
SPPL3-202ENST00000392495 GTF3C3Q9Y5Q9 886 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms