RNA–Protein interactions for RNA: ENST00000485807.1

JMJD4-205, Transcript of jumonji domain containing 4, humanhuman

TSL 2

Gene JMJD4, Length 3,749 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JMJD4-205ENST00000485807 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
JMJD4-205ENST00000485807 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
JMJD4-205ENST00000485807 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
JMJD4-205ENST00000485807 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
JMJD4-205ENST00000485807 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
JMJD4-205ENST00000485807 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
JMJD4-205ENST00000485807 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
JMJD4-205ENST00000485807 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
JMJD4-205ENST00000485807 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.76
JMJD4-205ENST00000485807 LOC105371045A0A1W2PR82 267 aa19.74■□□□□ 0.75
JMJD4-205ENST00000485807 FAM9AQ8IZU1 332 aaPredicted RBP19.73■□□□□ 0.75
JMJD4-205ENST00000485807 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
JMJD4-205ENST00000485807 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
JMJD4-205ENST00000485807 HRCP23327 699 aa19.55■□□□□ 0.72
JMJD4-205ENST00000485807 ABCC9O60706 1549 aa19.43■□□□□ 0.7
JMJD4-205ENST00000485807 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
JMJD4-205ENST00000485807 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
JMJD4-205ENST00000485807 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.69
JMJD4-205ENST00000485807 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
JMJD4-205ENST00000485807 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
JMJD4-205ENST00000485807 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.66
JMJD4-205ENST00000485807 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
JMJD4-205ENST00000485807 CECR2Q9BXF3 1484 aa18.89■□□□□ 0.61
JMJD4-205ENST00000485807 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
JMJD4-205ENST00000485807 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
JMJD4-205ENST00000485807 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
JMJD4-205ENST00000485807 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
JMJD4-205ENST00000485807 NACADO15069 1562 aa18.82■□□□□ 0.6
JMJD4-205ENST00000485807 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
JMJD4-205ENST00000485807 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
JMJD4-205ENST00000485807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
JMJD4-205ENST00000485807 APLP2Q06481 763 aa18.67■□□□□ 0.58
JMJD4-205ENST00000485807 WIZO95785 1651 aa18.57■□□□□ 0.56
JMJD4-205ENST00000485807 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
JMJD4-205ENST00000485807 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
JMJD4-205ENST00000485807 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
JMJD4-205ENST00000485807 ABCC8Q09428 1581 aa18.37■□□□□ 0.53
JMJD4-205ENST00000485807 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
JMJD4-205ENST00000485807 SOGA1O94964 1423 aa18.31■□□□□ 0.52
JMJD4-205ENST00000485807 CEP162Q5TB80 1403 aa18.29■□□□□ 0.52
JMJD4-205ENST00000485807 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
JMJD4-205ENST00000485807 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.51
JMJD4-205ENST00000485807 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
JMJD4-205ENST00000485807 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
JMJD4-205ENST00000485807 WRNQ14191 1432 aaPredicted RBP eCLIP18.2■□□□□ 0.5
JMJD4-205ENST00000485807 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
JMJD4-205ENST00000485807 TNIKQ9UKE5 1360 aa18.18■□□□□ 0.5
JMJD4-205ENST00000485807 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
JMJD4-205ENST00000485807 ITGAEP38570 1179 aa18.15■□□□□ 0.5
JMJD4-205ENST00000485807 EEA1Q15075 1411 aa18.14■□□□□ 0.49
JMJD4-205ENST00000485807 RUSC2Q8N2Y8 1516 aa18.11■□□□□ 0.49
JMJD4-205ENST00000485807 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
JMJD4-205ENST00000485807 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
JMJD4-205ENST00000485807 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
JMJD4-205ENST00000485807 CLIP1P30622 1438 aa18.07■□□□□ 0.48
JMJD4-205ENST00000485807 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
JMJD4-205ENST00000485807 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.47
JMJD4-205ENST00000485807 CEP164Q9UPV0 1460 aa17.99■□□□□ 0.47
JMJD4-205ENST00000485807 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
JMJD4-205ENST00000485807 GTF3C3Q9Y5Q9 886 aa17.95■□□□□ 0.46
JMJD4-205ENST00000485807 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
JMJD4-205ENST00000485807 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
JMJD4-205ENST00000485807 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
JMJD4-205ENST00000485807 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
JMJD4-205ENST00000485807 UNC13AQ9UPW8 1703 aa17.81■□□□□ 0.44
JMJD4-205ENST00000485807 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
JMJD4-205ENST00000485807 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
JMJD4-205ENST00000485807 VPS8Q8N3P4 1428 aa17.8■□□□□ 0.44
JMJD4-205ENST00000485807 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
JMJD4-205ENST00000485807 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
JMJD4-205ENST00000485807 MIER1Q8N108 512 aa17.76■□□□□ 0.43
JMJD4-205ENST00000485807 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
JMJD4-205ENST00000485807 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
JMJD4-205ENST00000485807 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.43
JMJD4-205ENST00000485807 CUX2O14529 1486 aa17.57■□□□□ 0.4
JMJD4-205ENST00000485807 KIF21BO75037 1637 aa17.57■□□□□ 0.4
JMJD4-205ENST00000485807 PEG3Q9GZU2 1588 aa17.54■□□□□ 0.4
JMJD4-205ENST00000485807 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
JMJD4-205ENST00000485807 CCNB3Q8WWL7 1395 aa17.5■□□□□ 0.39
JMJD4-205ENST00000485807 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
JMJD4-205ENST00000485807 ARID3CA6NKF2 412 aa17.46■□□□□ 0.39
JMJD4-205ENST00000485807 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
JMJD4-205ENST00000485807 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
JMJD4-205ENST00000485807 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
JMJD4-205ENST00000485807 DHX57Q6P158 1386 aaKnown RBP17.41■□□□□ 0.38
JMJD4-205ENST00000485807 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
JMJD4-205ENST00000485807 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
JMJD4-205ENST00000485807 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
JMJD4-205ENST00000485807 ARAP1Q96P48 1450 aa17.41■□□□□ 0.38
JMJD4-205ENST00000485807 CUX1P39880 1505 aa17.4■□□□□ 0.38
JMJD4-205ENST00000485807 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.38
JMJD4-205ENST00000485807 TRIM52Q96A61 297 aa17.38■□□□□ 0.37
JMJD4-205ENST00000485807 IGF1RP08069 1367 aa17.37■□□□□ 0.37
JMJD4-205ENST00000485807 CFTRP13569 1480 aa17.36■□□□□ 0.37
JMJD4-205ENST00000485807 NEFLP07196 543 aa17.36■□□□□ 0.37
JMJD4-205ENST00000485807 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
JMJD4-205ENST00000485807 MTUS2Q5JR59 1369 aa17.34■□□□□ 0.37
JMJD4-205ENST00000485807 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
JMJD4-205ENST00000485807 BCANQ96GW7 911 aa17.33■□□□□ 0.36
JMJD4-205ENST00000485807 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms