RNA–Protein interactions for RNA: ENST00000509064.5

SLC41A3-212, Transcript of solute carrier family 41 member 3, humanhuman

TSL 4

Gene SLC41A3, Length 569 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-212ENST00000509064 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.19
SLC41A3-212ENST00000509064 ABCC9O60706 1549 aa21.18■□□□□ 0.98
SLC41A3-212ENST00000509064 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
SLC41A3-212ENST00000509064 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
SLC41A3-212ENST00000509064 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
SLC41A3-212ENST00000509064 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
SLC41A3-212ENST00000509064 NACADO15069 1562 aa19.53■□□□□ 0.72
SLC41A3-212ENST00000509064 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
SLC41A3-212ENST00000509064 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
SLC41A3-212ENST00000509064 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
SLC41A3-212ENST00000509064 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
SLC41A3-212ENST00000509064 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
SLC41A3-212ENST00000509064 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
SLC41A3-212ENST00000509064 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
SLC41A3-212ENST00000509064 SHROOM4Q9ULL8 1493 aa18.89■□□□□ 0.61
SLC41A3-212ENST00000509064 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
SLC41A3-212ENST00000509064 SCRIBQ14160 1630 aa18.71■□□□□ 0.58
SLC41A3-212ENST00000509064 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.56
SLC41A3-212ENST00000509064 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
SLC41A3-212ENST00000509064 CUX2O14529 1486 aa18.47■□□□□ 0.55
SLC41A3-212ENST00000509064 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
SLC41A3-212ENST00000509064 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
SLC41A3-212ENST00000509064 NESP48681 1621 aa18.01■□□□□ 0.47
SLC41A3-212ENST00000509064 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
SLC41A3-212ENST00000509064 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.46
SLC41A3-212ENST00000509064 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
SLC41A3-212ENST00000509064 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
SLC41A3-212ENST00000509064 SMARCA2P51531 1590 aa17.83■□□□□ 0.45
SLC41A3-212ENST00000509064 KIF21AQ7Z4S6 1674 aa17.81■□□□□ 0.44
SLC41A3-212ENST00000509064 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
SLC41A3-212ENST00000509064 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
SLC41A3-212ENST00000509064 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
SLC41A3-212ENST00000509064 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
SLC41A3-212ENST00000509064 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
SLC41A3-212ENST00000509064 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
SLC41A3-212ENST00000509064 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
SLC41A3-212ENST00000509064 WDR62O43379 1518 aa17.52■□□□□ 0.4
SLC41A3-212ENST00000509064 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
SLC41A3-212ENST00000509064 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
SLC41A3-212ENST00000509064 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
SLC41A3-212ENST00000509064 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
SLC41A3-212ENST00000509064 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
SLC41A3-212ENST00000509064 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
SLC41A3-212ENST00000509064 CEP164Q9UPV0 1460 aa17.36■□□□□ 0.37
SLC41A3-212ENST00000509064 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
SLC41A3-212ENST00000509064 ARHGEF11O15085 1522 aa17.27■□□□□ 0.36
SLC41A3-212ENST00000509064 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
SLC41A3-212ENST00000509064 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
SLC41A3-212ENST00000509064 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
SLC41A3-212ENST00000509064 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
SLC41A3-212ENST00000509064 WIZO95785 1651 aa17.18■□□□□ 0.34
SLC41A3-212ENST00000509064 CFTRP13569 1480 aa17.1■□□□□ 0.33
SLC41A3-212ENST00000509064 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
SLC41A3-212ENST00000509064 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
SLC41A3-212ENST00000509064 CHD1O14646 1710 aa17.04■□□□□ 0.32
SLC41A3-212ENST00000509064 IFT140Q96RY7 1462 aa17.01■□□□□ 0.31
SLC41A3-212ENST00000509064 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
SLC41A3-212ENST00000509064 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
SLC41A3-212ENST00000509064 SUPT5HO00267 1087 aaKnown RBP16.94■□□□□ 0.3
SLC41A3-212ENST00000509064 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
SLC41A3-212ENST00000509064 FBLN2P98095 1184 aa16.89■□□□□ 0.29
SLC41A3-212ENST00000509064 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
SLC41A3-212ENST00000509064 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
SLC41A3-212ENST00000509064 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.29
SLC41A3-212ENST00000509064 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
SLC41A3-212ENST00000509064 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
SLC41A3-212ENST00000509064 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
SLC41A3-212ENST00000509064 CLASP1Q7Z460 1538 aa16.73■□□□□ 0.27
SLC41A3-212ENST00000509064 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
SLC41A3-212ENST00000509064 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
SLC41A3-212ENST00000509064 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
SLC41A3-212ENST00000509064 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
SLC41A3-212ENST00000509064 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
SLC41A3-212ENST00000509064 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
SLC41A3-212ENST00000509064 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
SLC41A3-212ENST00000509064 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
SLC41A3-212ENST00000509064 SOGA1O94964 1423 aa16.57■□□□□ 0.24
SLC41A3-212ENST00000509064 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
SLC41A3-212ENST00000509064 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
SLC41A3-212ENST00000509064 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
SLC41A3-212ENST00000509064 SYNJ2O15056 1496 aa16.52■□□□□ 0.23
SLC41A3-212ENST00000509064 KIF13AQ9H1H9 1805 aa16.51■□□□□ 0.23
SLC41A3-212ENST00000509064 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
SLC41A3-212ENST00000509064 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
SLC41A3-212ENST00000509064 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
SLC41A3-212ENST00000509064 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
SLC41A3-212ENST00000509064 CUX1P39880 1505 aa16.35■□□□□ 0.21
SLC41A3-212ENST00000509064 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
SLC41A3-212ENST00000509064 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
SLC41A3-212ENST00000509064 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
SLC41A3-212ENST00000509064 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
SLC41A3-212ENST00000509064 SHROOM2Q13796 1616 aa16.28■□□□□ 0.2
SLC41A3-212ENST00000509064 FAM69CQ0P6D2 419 aa16.27■□□□□ 0.2
SLC41A3-212ENST00000509064 KDM6BO15054 1643 aa16.27■□□□□ 0.19
SLC41A3-212ENST00000509064 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
SLC41A3-212ENST00000509064 ABCC10Q5T3U5 1492 aa16.23■□□□□ 0.19
SLC41A3-212ENST00000509064 NUP160Q12769 1436 aa16.23■□□□□ 0.19
SLC41A3-212ENST00000509064 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
SLC41A3-212ENST00000509064 ADAMTS12P58397 1594 aa16.21■□□□□ 0.19
SLC41A3-212ENST00000509064 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms