RNA–Protein interactions for RNA: ENST00000559478.1

WDR20-218, Transcript of WD repeat domain 20, humanhuman

TSL 2

Gene WDR20, Length 422 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR20-218ENST00000559478 AEBP2Q6ZN18 517 aaPredicted RBP28.76■■■□□ 2.19
WDR20-218ENST00000559478 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
WDR20-218ENST00000559478 SENP3Q9H4L4 574 aaPredicted RBP24.59■■□□□ 1.53
WDR20-218ENST00000559478 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
WDR20-218ENST00000559478 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
WDR20-218ENST00000559478 FOXD1Q16676 465 aa22.86■■□□□ 1.25
WDR20-218ENST00000559478 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
WDR20-218ENST00000559478 MSH5O43196 834 aa21.43■■□□□ 1.02
WDR20-218ENST00000559478 PIAS4Q8N2W9 510 aaPredicted RBP21.43■■□□□ 1.02
WDR20-218ENST00000559478 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
WDR20-218ENST00000559478 ADRA2BP18089 450 aa21.35■■□□□ 1.01
WDR20-218ENST00000559478 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
WDR20-218ENST00000559478 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
WDR20-218ENST00000559478 ABCC9O60706 1549 aa20.18■□□□□ 0.82
WDR20-218ENST00000559478 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
WDR20-218ENST00000559478 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
WDR20-218ENST00000559478 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
WDR20-218ENST00000559478 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
WDR20-218ENST00000559478 NACADO15069 1562 aa19.51■□□□□ 0.71
WDR20-218ENST00000559478 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
WDR20-218ENST00000559478 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
WDR20-218ENST00000559478 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
WDR20-218ENST00000559478 MYO15BQ96JP2 1530 aa19.45■□□□□ 0.7
WDR20-218ENST00000559478 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
WDR20-218ENST00000559478 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.64
WDR20-218ENST00000559478 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
WDR20-218ENST00000559478 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
WDR20-218ENST00000559478 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.62
WDR20-218ENST00000559478 CNKSR2Q8WXI2 1034 aa18.87■□□□□ 0.61
WDR20-218ENST00000559478 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
WDR20-218ENST00000559478 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
WDR20-218ENST00000559478 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
WDR20-218ENST00000559478 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
WDR20-218ENST00000559478 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
WDR20-218ENST00000559478 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
WDR20-218ENST00000559478 CECR2Q9BXF3 1484 aa18.36■□□□□ 0.53
WDR20-218ENST00000559478 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
WDR20-218ENST00000559478 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
WDR20-218ENST00000559478 RNF39Q9H2S5 420 aa18.26■□□□□ 0.51
WDR20-218ENST00000559478 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
WDR20-218ENST00000559478 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
WDR20-218ENST00000559478 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
WDR20-218ENST00000559478 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
WDR20-218ENST00000559478 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
WDR20-218ENST00000559478 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
WDR20-218ENST00000559478 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
WDR20-218ENST00000559478 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
WDR20-218ENST00000559478 PEG3Q9GZU2 1588 aa18.01■□□□□ 0.47
WDR20-218ENST00000559478 C1QBPQ07021 282 aaKnown RBP18.01■□□□□ 0.47
WDR20-218ENST00000559478 WIZO95785 1651 aa18.01■□□□□ 0.47
WDR20-218ENST00000559478 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
WDR20-218ENST00000559478 KCNA4P22459 653 aa17.95■□□□□ 0.46
WDR20-218ENST00000559478 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
WDR20-218ENST00000559478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
WDR20-218ENST00000559478 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
WDR20-218ENST00000559478 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
WDR20-218ENST00000559478 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
WDR20-218ENST00000559478 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
WDR20-218ENST00000559478 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
WDR20-218ENST00000559478 NESP48681 1621 aa17.54■□□□□ 0.4
WDR20-218ENST00000559478 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.39
WDR20-218ENST00000559478 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
WDR20-218ENST00000559478 CFTRP13569 1480 aa17.45■□□□□ 0.38
WDR20-218ENST00000559478 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
WDR20-218ENST00000559478 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
WDR20-218ENST00000559478 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
WDR20-218ENST00000559478 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
WDR20-218ENST00000559478 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.37
WDR20-218ENST00000559478 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
WDR20-218ENST00000559478 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
WDR20-218ENST00000559478 CAPN15O75808 1086 aa17.26■□□□□ 0.35
WDR20-218ENST00000559478 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
WDR20-218ENST00000559478 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
WDR20-218ENST00000559478 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
WDR20-218ENST00000559478 URB2Q14146 1524 aaKnown RBP17.13■□□□□ 0.33
WDR20-218ENST00000559478 APLP2Q06481 763 aa17.13■□□□□ 0.33
WDR20-218ENST00000559478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
WDR20-218ENST00000559478 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
WDR20-218ENST00000559478 DSG3P32926 999 aa17.11■□□□□ 0.33
WDR20-218ENST00000559478 WDR62O43379 1518 aa17.1■□□□□ 0.33
WDR20-218ENST00000559478 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
WDR20-218ENST00000559478 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
WDR20-218ENST00000559478 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
WDR20-218ENST00000559478 CUX2O14529 1486 aa17.05■□□□□ 0.32
WDR20-218ENST00000559478 CUX1P39880 1505 aa17.04■□□□□ 0.32
WDR20-218ENST00000559478 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.321e-6■■■■■ 58.5
WDR20-218ENST00000559478 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
WDR20-218ENST00000559478 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
WDR20-218ENST00000559478 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
WDR20-218ENST00000559478 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
WDR20-218ENST00000559478 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
WDR20-218ENST00000559478 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
WDR20-218ENST00000559478 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
WDR20-218ENST00000559478 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
WDR20-218ENST00000559478 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
WDR20-218ENST00000559478 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
WDR20-218ENST00000559478 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
WDR20-218ENST00000559478 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
WDR20-218ENST00000559478 SOGA1O94964 1423 aa16.88■□□□□ 0.29
WDR20-218ENST00000559478 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms