Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDKAL1Q5VV42 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 AC103834.1-201ENST00000520383 144 ntBASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 SNX5-217ENST00000606557 1087 ntBASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDKAL1Q5VV42 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDKAL1Q5VV42 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDKAL1Q5VV42 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CDKAL1Q5VV42 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDKAL1Q5VV42 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDKAL1Q5VV42 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDKAL1Q5VV42 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDKAL1Q5VV42 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDKAL1Q5VV42 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDKAL1Q5VV42 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CDKAL1Q5VV42 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.59■■□□□ 1.53
CDKAL1Q5VV42 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDKAL1Q5VV42 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDKAL1Q5VV42 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDKAL1Q5VV42 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.58■■□□□ 1.53
CDKAL1Q5VV42 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CDKAL1Q5VV42 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CDKAL1Q5VV42 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CDKAL1Q5VV42 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.58■■□□□ 1.52
CDKAL1Q5VV42 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CDKAL1Q5VV42 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CDKAL1Q5VV42 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDKAL1Q5VV42 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDKAL1Q5VV42 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.57■■□□□ 1.52
CDKAL1Q5VV42 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.57■■□□□ 1.52
CDKAL1Q5VV42 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.57■■□□□ 1.52
CDKAL1Q5VV42 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CDKAL1Q5VV42 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDKAL1Q5VV42 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDKAL1Q5VV42 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms