Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.51■□□□□ 0.554e-6■■■■□ 25.8
DDX59Q5T1V6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.174e-6■■■■□ 25.8
DDX59Q5T1V6 CDK17-202ENST00000542666 1769 ntTSL 2 BASIC11.16□□□□□ -0.624e-6■■■■□ 25.8
DDX59Q5T1V6 CDK17-210ENST00000552262 566 ntTSL 39.96□□□□□ -0.824e-6■■■■□ 25.8
DDX59Q5T1V6 CDK17-211ENST00000552496 583 ntTSL 37.03□□□□□ -1.284e-6■■■■□ 25.8
DDX59Q5T1V6 CDK17-209ENST00000551816 626 ntTSL 42.6□□□□□ -1.994e-6■■■■□ 25.8
DDX59Q5T1V6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.691e-7■■■■□ 25.7
DDX59Q5T1V6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.35■□□□□ 0.691e-7■■■■□ 25.7
DDX59Q5T1V6 HDAC4-214ENST00000535493 2743 ntTSL 213.06□□□□□ -0.321e-7■■■■□ 25.7
DDX59Q5T1V6 HDAC4-208ENST00000463007 3158 ntTSL 1 (best)12.1□□□□□ -0.471e-7■■■■□ 25.7
DDX59Q5T1V6 HDAC4-210ENST00000493582 3188 ntTSL 1 (best)11.72□□□□□ -0.531e-7■■■■□ 25.7
DDX59Q5T1V6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.992e-6■■■■□ 25.7
DDX59Q5T1V6 PLD1-205ENST00000440204 646 ntTSL 411.78□□□□□ -0.526e-8■■■■□ 25.7
DDX59Q5T1V6 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.32□□□□□ -1.46e-8■■■■□ 25.7
DDX59Q5T1V6 PLD1-216ENST00000498278 996 ntTSL 55.16□□□□□ -1.586e-8■■■■□ 25.7
DDX59Q5T1V6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.596e-8■■■■□ 25.7
DDX59Q5T1V6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.146e-7■■■■□ 25.7
DDX59Q5T1V6 CNOT3-210ENST00000618939 4516 ntTSL 513.45□□□□□ -0.266e-7■■■■□ 25.7
DDX59Q5T1V6 HS6ST1-204ENST00000494089 585 ntTSL 215.63■□□□□ 0.092e-6■■■■□ 25.7
DDX59Q5T1V6 HS6ST1-203ENST00000469019 559 ntTSL 413.73□□□□□ -0.212e-6■■■■□ 25.7
DDX59Q5T1V6 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.422e-6■■■■□ 25.7
DDX59Q5T1V6 MICALL2-208ENST00000472100 5248 ntTSL 217.72■□□□□ 0.432e-6■■■■□ 25.7
DDX59Q5T1V6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.182e-6■■■■□ 25.7
DDX59Q5T1V6 MICALL2-210ENST00000482839 852 ntTSL 213.62□□□□□ -0.232e-6■■■■□ 25.7
DDX59Q5T1V6 MICALL2-202ENST00000413446 3046 ntTSL 213.27□□□□□ -0.282e-6■■■■□ 25.7
DDX59Q5T1V6 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.49□□□□□ -0.093e-15■■■■□ 25.6
DDX59Q5T1V6 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.28□□□□□ -1.243e-15■■■■□ 25.6
DDX59Q5T1V6 LRP1-208ENST00000555124 550 ntTSL 413.5□□□□□ -0.252e-7■■■■□ 25.6
DDX59Q5T1V6 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.982e-7■■■■□ 25.6
DDX59Q5T1V6 WDR26-203ENST00000445239 784 ntTSL 54.45□□□□□ -1.72e-7■■■■□ 25.6
DDX59Q5T1V6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.37■□□□□ 0.372e-7■■■■□ 25.6
DDX59Q5T1V6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.322e-7■■■■□ 25.6
DDX59Q5T1V6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.072e-7■■■■□ 25.6
DDX59Q5T1V6 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.49□□□□□ -0.252e-7■■■■□ 25.6
DDX59Q5T1V6 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.95□□□□□ -0.342e-7■■■■□ 25.6
DDX59Q5T1V6 MCF2L-202ENST00000375597 3413 ntTSL 1 (best) BASIC11.48□□□□□ -0.572e-7■■■■□ 25.6
DDX59Q5T1V6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.292e-7■■■■□ 25.5
DDX59Q5T1V6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.861e-6■■■■□ 25.5
DDX59Q5T1V6 SHANK2-214ENST00000468619 2775 ntTSL 213.43□□□□□ -0.262e-6■■■■□ 25.5
DDX59Q5T1V6 GSE1-204ENST00000411612 872 ntTSL 519.63■□□□□ 0.734e-7■■■■□ 25.4
DDX59Q5T1V6 SLC19A1-203ENST00000417954 3572 ntTSL 1 (best)14.4□□□□□ -0.12e-7■■■■□ 25.4
DDX59Q5T1V6 INTS11-223ENST00000498173 1589 ntTSL 220.49■□□□□ 0.876e-7■■■■□ 25.4
DDX59Q5T1V6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.03■□□□□ 0.646e-7■■■■□ 25.4
DDX59Q5T1V6 INTS11-220ENST00000493534 896 ntTSL 317.51■□□□□ 0.396e-7■■■■□ 25.4
DDX59Q5T1V6 INTS11-221ENST00000496353 2428 ntTSL 217.38■□□□□ 0.376e-7■■■■□ 25.4
DDX59Q5T1V6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.145e-7■■■■□ 25.4
DDX59Q5T1V6 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.185e-7■■■■□ 25.4
DDX59Q5T1V6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.225e-7■■■■□ 25.4
DDX59Q5T1V6 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.435e-7■■■■□ 25.4
DDX59Q5T1V6 LTBP3-211ENST00000528966 553 ntTSL 415.47■□□□□ 0.078e-23■■■■□ 25.4
DDX59Q5T1V6 LTBP3-215ENST00000529764 528 ntTSL 55.9□□□□□ -1.468e-23■■■■□ 25.4
DDX59Q5T1V6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.147e-7■■■■□ 25.4
DDX59Q5T1V6 LAMA5-209ENST00000481120 386 ntTSL 220.49■□□□□ 0.871e-9■■■■□ 25.4
DDX59Q5T1V6 MAEA-209ENST00000506530 5371 ntTSL 219.28■□□□□ 0.681e-9■■■■□ 25.4
DDX59Q5T1V6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.511e-9■■■■□ 25.4
DDX59Q5T1V6 SLC16A3-210ENST00000580189 872 ntTSL 517.78■□□□□ 0.441e-9■■■■□ 25.4
DDX59Q5T1V6 MAEA-215ENST00000512289 2426 ntTSL 217■□□□□ 0.311e-9■■■■□ 25.4
DDX59Q5T1V6 MAEA-204ENST00000503162 2069 ntTSL 215.73■□□□□ 0.111e-9■■■■□ 25.4
DDX59Q5T1V6 MAEA-220ENST00000515766 3136 ntTSL 215.45■□□□□ 0.061e-9■■■■□ 25.4
DDX59Q5T1V6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.041e-9■■■■□ 25.4
DDX59Q5T1V6 SLC16A3-204ENST00000578522 535 ntTSL 414.67□□□□□ -0.061e-9■■■■□ 25.4
DDX59Q5T1V6 SLC22A18-212ENST00000498209 782 ntTSL 313.18□□□□□ -0.37e-14■■■■□ 25.4
DDX59Q5T1V6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.511e-10■■■■□ 25.3
DDX59Q5T1V6 ZBTB44-203ENST00000445008 3848 ntTSL 1 (best)14.14□□□□□ -0.159e-7■■■■□ 25.3
DDX59Q5T1V6 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.399e-7■■■■□ 25.3
DDX59Q5T1V6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.64■□□□□ 0.732e-6■■■■□ 25.3
DDX59Q5T1V6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.672e-6■■■■□ 25.3
DDX59Q5T1V6 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.55□□□□□ -0.242e-6■■■■□ 25.3
DDX59Q5T1V6 NGEF-206ENST00000420650 519 ntTSL 512.65□□□□□ -0.382e-6■■■■□ 25.3
DDX59Q5T1V6 NGEF-205ENST00000416114 667 ntTSL 310.22□□□□□ -0.772e-6■■■■□ 25.3
DDX59Q5T1V6 ROCK2-201ENST00000261535 1795 ntTSL 521.16■□□□□ 0.984e-9■■■■□ 25.3
DDX59Q5T1V6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.74e-9■■■■□ 25.3
DDX59Q5T1V6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.8■□□□□ 0.284e-9■■■■□ 25.3
DDX59Q5T1V6 ROCK2-206ENST00000462366 563 ntTSL 34.61□□□□□ -1.674e-9■■■■□ 25.3
DDX59Q5T1V6 CCNK-204ENST00000555049 1606 ntTSL 1 (best) BASIC10.2□□□□□ -0.784e-10■■■■□ 25.3
DDX59Q5T1V6 CCNK-203ENST00000553865 5627 ntTSL 1 (best)9.04□□□□□ -0.964e-10■■■■□ 25.3
DDX59Q5T1V6 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.994e-10■■■■□ 25.3
DDX59Q5T1V6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.83■□□□□ 0.451e-7■■■■□ 25.3
DDX59Q5T1V6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.441e-7■■■■□ 25.3
DDX59Q5T1V6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.171e-7■■■■□ 25.3
DDX59Q5T1V6 SH3GL1P2-201ENST00000582245 1082 ntBASIC10.94□□□□□ -0.669e-7■■■■□ 25.3
DDX59Q5T1V6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.561e-6■■■■□ 25.3
DDX59Q5T1V6 SBNO2-207ENST00000590176 561 ntTSL 417.11■□□□□ 0.331e-6■■■■□ 25.3
DDX59Q5T1V6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.211e-6■■■■□ 25.3
DDX59Q5T1V6 SREBF1-203ENST00000395751 4653 ntTSL 216.91■□□□□ 0.31e-7■■■■□ 25.2
DDX59Q5T1V6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.141e-7■■■■□ 25.2
DDX59Q5T1V6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.211e-7■■■■□ 25.2
DDX59Q5T1V6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.582e-6■■■■□ 25.2
DDX59Q5T1V6 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.75□□□□□ -1.175e-10■■■■□ 25.2
DDX59Q5T1V6 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC11.58□□□□□ -0.557e-7■■■■□ 25.2
DDX59Q5T1V6 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.265e-7■■■■□ 25.2
DDX59Q5T1V6 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.285e-7■■■■□ 25.2
DDX59Q5T1V6 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.355e-7■■■■□ 25.2
DDX59Q5T1V6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.045e-18■■■■□ 25.2
DDX59Q5T1V6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.055e-18■■■■□ 25.2
DDX59Q5T1V6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.145e-18■■■■□ 25.2
DDX59Q5T1V6 MROH1-205ENST00000527552 5832 ntTSL 1 (best)12.61□□□□□ -0.395e-18■■■■□ 25.2
DDX59Q5T1V6 MROH1-208ENST00000532255 3905 ntTSL 211.53□□□□□ -0.565e-18■■■■□ 25.2
DDX59Q5T1V6 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.241e-9■■■■□ 25.2
DDX59Q5T1V6 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.281e-9■■■■□ 25.2
Retrieved 100 of 7,289 protein–RNA pairs in 159.2 ms