RNA–Protein interactions for RNA: ENST00000498209.6

SLC22A18-212, Transcript of solute carrier family 22 member 18, humanhuman

TSL 3

Gene SLC22A18, Length 782 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A18-212ENST00000498209 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
SLC22A18-212ENST00000498209 CCDC180Q9P1Z9 1646 aa31.06■■■□□ 2.56
SLC22A18-212ENST00000498209 ABCC9O60706 1549 aa30.63■■■□□ 2.49
SLC22A18-212ENST00000498209 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
SLC22A18-212ENST00000498209 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
SLC22A18-212ENST00000498209 NACADO15069 1562 aa29.26■■■□□ 2.28
SLC22A18-212ENST00000498209 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
SLC22A18-212ENST00000498209 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
SLC22A18-212ENST00000498209 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
SLC22A18-212ENST00000498209 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
SLC22A18-212ENST00000498209 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
SLC22A18-212ENST00000498209 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
SLC22A18-212ENST00000498209 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
SLC22A18-212ENST00000498209 DNAJC5BQ9UF47 199 aa28.31■■■□□ 2.12
SLC22A18-212ENST00000498209 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
SLC22A18-212ENST00000498209 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
SLC22A18-212ENST00000498209 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
SLC22A18-212ENST00000498209 CECR2Q9BXF3 1484 aa27.51■■■□□ 2
SLC22A18-212ENST00000498209 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
SLC22A18-212ENST00000498209 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
SLC22A18-212ENST00000498209 NCAPD3P42695 1498 aa27.03■■□□□ 1.92
SLC22A18-212ENST00000498209 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
SLC22A18-212ENST00000498209 SMARCA2P51531 1590 aa26.96■■□□□ 1.91
SLC22A18-212ENST00000498209 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
SLC22A18-212ENST00000498209 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
SLC22A18-212ENST00000498209 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
SLC22A18-212ENST00000498209 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
SLC22A18-212ENST00000498209 WIZO95785 1651 aa26.64■■□□□ 1.86
SLC22A18-212ENST00000498209 RSF1Q96T23 1441 aaPredicted RBP26.57■■□□□ 1.84
SLC22A18-212ENST00000498209 NESP48681 1621 aa26.47■■□□□ 1.83
SLC22A18-212ENST00000498209 ERCC6Q03468 1493 aa26.37■■□□□ 1.81
SLC22A18-212ENST00000498209 LAMC3Q9Y6N6 1575 aa26.32■■□□□ 1.8
SLC22A18-212ENST00000498209 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
SLC22A18-212ENST00000498209 CADPSQ9ULU8 1353 aa26.24■■□□□ 1.79
SLC22A18-212ENST00000498209 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
SLC22A18-212ENST00000498209 CUX2O14529 1486 aa26.13■■□□□ 1.77
SLC22A18-212ENST00000498209 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
SLC22A18-212ENST00000498209 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
SLC22A18-212ENST00000498209 CFTRP13569 1480 aa26.05■■□□□ 1.76
SLC22A18-212ENST00000498209 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
SLC22A18-212ENST00000498209 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
SLC22A18-212ENST00000498209 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
SLC22A18-212ENST00000498209 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
SLC22A18-212ENST00000498209 WDR62O43379 1518 aa25.83■■□□□ 1.72
SLC22A18-212ENST00000498209 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
SLC22A18-212ENST00000498209 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
SLC22A18-212ENST00000498209 URB2Q14146 1524 aaKnown RBP25.7■■□□□ 1.7
SLC22A18-212ENST00000498209 DNAJC5Q9H3Z4 198 aa25.56■■□□□ 1.68
SLC22A18-212ENST00000498209 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
SLC22A18-212ENST00000498209 ABCC8Q09428 1581 aa25.45■■□□□ 1.66
SLC22A18-212ENST00000498209 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
SLC22A18-212ENST00000498209 IFT140Q96RY7 1462 aa25.37■■□□□ 1.65
SLC22A18-212ENST00000498209 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
SLC22A18-212ENST00000498209 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
SLC22A18-212ENST00000498209 CUX1P39880 1505 aa25.27■■□□□ 1.64
SLC22A18-212ENST00000498209 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
SLC22A18-212ENST00000498209 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
SLC22A18-212ENST00000498209 RAD54L2Q9Y4B4 1467 aa25.21■■□□□ 1.63
SLC22A18-212ENST00000498209 SOGA1O94964 1423 aa25.19■■□□□ 1.62
SLC22A18-212ENST00000498209 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
SLC22A18-212ENST00000498209 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.621e-7■■■■■ 32.3
SLC22A18-212ENST00000498209 TDRD9Q8NDG6 1382 aaKnown RBP25.08■■□□□ 1.61
SLC22A18-212ENST00000498209 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
SLC22A18-212ENST00000498209 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
SLC22A18-212ENST00000498209 SYNJ1O43426 1573 aa25■■□□□ 1.59
SLC22A18-212ENST00000498209 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
SLC22A18-212ENST00000498209 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
SLC22A18-212ENST00000498209 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
SLC22A18-212ENST00000498209 ABCA10Q8WWZ4 1543 aa24.94■■□□□ 1.58
SLC22A18-212ENST00000498209 SNAPC4Q5SXM2 1469 aa24.9■■□□□ 1.58
SLC22A18-212ENST00000498209 CHD1O14646 1710 aa24.89■■□□□ 1.57
SLC22A18-212ENST00000498209 GRIN2BQ13224 1484 aa24.89■■□□□ 1.57
SLC22A18-212ENST00000498209 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.57
SLC22A18-212ENST00000498209 FBLN2P98095 1184 aa24.88■■□□□ 1.57
SLC22A18-212ENST00000498209 ABCA5Q8WWZ7 1642 aa24.85■■□□□ 1.57
SLC22A18-212ENST00000498209 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.56
SLC22A18-212ENST00000498209 PBRM1Q86U86 1689 aa24.82■■□□□ 1.56
SLC22A18-212ENST00000498209 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
SLC22A18-212ENST00000498209 SYNJ2O15056 1496 aa24.74■■□□□ 1.55
SLC22A18-212ENST00000498209 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
SLC22A18-212ENST00000498209 RIMBP3CA6NJZ7 1639 aa24.67■■□□□ 1.54
SLC22A18-212ENST00000498209 RIMBP3BA6NNM3 1639 aa24.67■■□□□ 1.54
SLC22A18-212ENST00000498209 RIMBP3Q9UFD9 1639 aa24.67■■□□□ 1.54
SLC22A18-212ENST00000498209 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
SLC22A18-212ENST00000498209 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
SLC22A18-212ENST00000498209 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
SLC22A18-212ENST00000498209 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
SLC22A18-212ENST00000498209 FHAD1B1AJZ9 1412 aa24.58■■□□□ 1.53
SLC22A18-212ENST00000498209 GRIN2AQ12879 1464 aa24.58■■□□□ 1.52
SLC22A18-212ENST00000498209 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
SLC22A18-212ENST00000498209 NUP160Q12769 1436 aa24.48■■□□□ 1.51
SLC22A18-212ENST00000498209 CEP170Q5SW79 1584 aa24.47■■□□□ 1.51
SLC22A18-212ENST00000498209 IGF1RP08069 1367 aa24.47■■□□□ 1.51
SLC22A18-212ENST00000498209 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
SLC22A18-212ENST00000498209 ARAP1Q96P48 1450 aa24.45■■□□□ 1.51
SLC22A18-212ENST00000498209 CUL7Q14999 1698 aa24.35■■□□□ 1.49
SLC22A18-212ENST00000498209 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
SLC22A18-212ENST00000498209 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
SLC22A18-212ENST00000498209 ERCC6L2Q5T890 1561 aa24.31■■□□□ 1.48
SLC22A18-212ENST00000498209 SHROOM2Q13796 1616 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms