RNA–Protein interactions for RNA: ENST00000552496.5

CDK17-211, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-211ENST00000552496 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
CDK17-211ENST00000552496 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
CDK17-211ENST00000552496 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
CDK17-211ENST00000552496 ABCC9O60706 1549 aa18.3■□□□□ 0.52
CDK17-211ENST00000552496 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
CDK17-211ENST00000552496 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
CDK17-211ENST00000552496 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
CDK17-211ENST00000552496 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
CDK17-211ENST00000552496 NACADO15069 1562 aa17.23■□□□□ 0.35
CDK17-211ENST00000552496 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
CDK17-211ENST00000552496 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
CDK17-211ENST00000552496 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDK17-211ENST00000552496 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
CDK17-211ENST00000552496 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
CDK17-211ENST00000552496 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
CDK17-211ENST00000552496 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
CDK17-211ENST00000552496 DCAF1Q9Y4B6 1507 aa16.72■□□□□ 0.27
CDK17-211ENST00000552496 SHROOM4Q9ULL8 1493 aa16.62■□□□□ 0.25
CDK17-211ENST00000552496 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
CDK17-211ENST00000552496 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
CDK17-211ENST00000552496 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
CDK17-211ENST00000552496 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
CDK17-211ENST00000552496 FOXD1Q16676 465 aa16.3■□□□□ 0.2
CDK17-211ENST00000552496 DNAJC5Q9H3Z4 198 aa15.98■□□□□ 0.15
CDK17-211ENST00000552496 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
CDK17-211ENST00000552496 ATAD2BQ9ULI0 1458 aa15.86■□□□□ 0.13
CDK17-211ENST00000552496 CUX2O14529 1486 aa15.81■□□□□ 0.12
CDK17-211ENST00000552496 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
CDK17-211ENST00000552496 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
CDK17-211ENST00000552496 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
CDK17-211ENST00000552496 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
CDK17-211ENST00000552496 NESP48681 1621 aa15.72■□□□□ 0.11
CDK17-211ENST00000552496 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
CDK17-211ENST00000552496 PEG3Q9GZU2 1588 aa15.67■□□□□ 0.1
CDK17-211ENST00000552496 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
CDK17-211ENST00000552496 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
CDK17-211ENST00000552496 PLPPR3Q6T4P5 718 aa15.57■□□□□ 0.08
CDK17-211ENST00000552496 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
CDK17-211ENST00000552496 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
CDK17-211ENST00000552496 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
CDK17-211ENST00000552496 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
CDK17-211ENST00000552496 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
CDK17-211ENST00000552496 WIZO95785 1651 aa15.4■□□□□ 0.06
CDK17-211ENST00000552496 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
CDK17-211ENST00000552496 WDR62O43379 1518 aa15.33■□□□□ 0.05
CDK17-211ENST00000552496 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
CDK17-211ENST00000552496 ADRA2BP18089 450 aa15.27■□□□□ 0.04
CDK17-211ENST00000552496 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
CDK17-211ENST00000552496 CFTRP13569 1480 aa15.25■□□□□ 0.03
CDK17-211ENST00000552496 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
CDK17-211ENST00000552496 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
CDK17-211ENST00000552496 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
CDK17-211ENST00000552496 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
CDK17-211ENST00000552496 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
CDK17-211ENST00000552496 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
CDK17-211ENST00000552496 MSH5O43196 834 aa15.13■□□□□ 0.01
CDK17-211ENST00000552496 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
CDK17-211ENST00000552496 PRDM2Q13029 1718 aa15.04■□□□□ -0
CDK17-211ENST00000552496 CCDC88BA6NC98 1476 aa15.03■□□□□ -0
CDK17-211ENST00000552496 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
CDK17-211ENST00000552496 IFT140Q96RY7 1462 aa14.96□□□□□ -0.01
CDK17-211ENST00000552496 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
CDK17-211ENST00000552496 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
CDK17-211ENST00000552496 RIMBP3CA6NJZ7 1639 aa14.89□□□□□ -0.03
CDK17-211ENST00000552496 RIMBP3BA6NNM3 1639 aa14.89□□□□□ -0.03
CDK17-211ENST00000552496 RIMBP3Q9UFD9 1639 aa14.89□□□□□ -0.03
CDK17-211ENST00000552496 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
CDK17-211ENST00000552496 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
CDK17-211ENST00000552496 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
CDK17-211ENST00000552496 ARHGEF11O15085 1522 aa14.84□□□□□ -0.03
CDK17-211ENST00000552496 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.049e-7■■■■■ 49.5
CDK17-211ENST00000552496 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
CDK17-211ENST00000552496 CHD1O14646 1710 aa14.78□□□□□ -0.04
CDK17-211ENST00000552496 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
CDK17-211ENST00000552496 CYB5RLQ6IPT4 315 aa14.74□□□□□ -0.05
CDK17-211ENST00000552496 POTEDQ86YR6 584 aa14.74□□□□□ -0.05
CDK17-211ENST00000552496 SOGA1O94964 1423 aa14.71□□□□□ -0.05
CDK17-211ENST00000552496 TDRD9Q8NDG6 1382 aaKnown RBP14.71□□□□□ -0.06
CDK17-211ENST00000552496 FBLN2P98095 1184 aa14.7□□□□□ -0.06
CDK17-211ENST00000552496 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
CDK17-211ENST00000552496 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
CDK17-211ENST00000552496 CUX1P39880 1505 aa14.66□□□□□ -0.06
CDK17-211ENST00000552496 SNAPC4Q5SXM2 1469 aa14.64□□□□□ -0.07
CDK17-211ENST00000552496 WDR97A6NE52 1622 aa14.64□□□□□ -0.07
CDK17-211ENST00000552496 CLASP1Q7Z460 1538 aa14.62□□□□□ -0.07
CDK17-211ENST00000552496 MAGI1Q96QZ7 1491 aaPredicted RBP14.6□□□□□ -0.07
CDK17-211ENST00000552496 GRIN2BQ13224 1484 aa14.59□□□□□ -0.07
CDK17-211ENST00000552496 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
CDK17-211ENST00000552496 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
CDK17-211ENST00000552496 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
CDK17-211ENST00000552496 SYNJ1O43426 1573 aa14.56□□□□□ -0.08
CDK17-211ENST00000552496 GAPVD1Q14C86 1478 aa14.53□□□□□ -0.08
CDK17-211ENST00000552496 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
CDK17-211ENST00000552496 PBRM1Q86U86 1689 aa14.51□□□□□ -0.09
CDK17-211ENST00000552496 ABCA5Q8WWZ7 1642 aa14.5□□□□□ -0.09
CDK17-211ENST00000552496 SUPT5HO00267 1087 aaKnown RBP14.44□□□□□ -0.1
CDK17-211ENST00000552496 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
CDK17-211ENST00000552496 GRIN2AQ12879 1464 aa14.41□□□□□ -0.1
CDK17-211ENST00000552496 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
CDK17-211ENST00000552496 NUP160Q12769 1436 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms