Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 AP3S2-215ENST00000561410 570 ntTSL 415.04■□□□□ -06e-7■■■■□ 26.2
MATR3P43243 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC14.98□□□□□ -0.016e-7■■■■□ 26.2
MATR3P43243 EIF4G1-227ENST00000455679 542 ntTSL 414.91□□□□□ -0.026e-7■■■■□ 26.2
MATR3P43243 RCOR3-211ENST00000528926 1497 ntTSL 214.89□□□□□ -0.038e-7■■■■□ 26.2
MATR3P43243 EIF4G1-214ENST00000427141 730 ntTSL 513.06□□□□□ -0.326e-7■■■■□ 26.2
MATR3P43243 EIF4G1-228ENST00000456033 694 ntTSL 512.61□□□□□ -0.396e-7■■■■□ 26.2
MATR3P43243 ZRANB2-207ENST00000611683 1257 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.396e-7■■■■□ 26.2
MATR3P43243 RUNX1-214ENST00000475045 1582 ntTSL 512.44□□□□□ -0.426e-7■■■■□ 26.2
MATR3P43243 EIF4G1-220ENST00000440448 578 ntTSL 412.17□□□□□ -0.466e-7■■■■□ 26.2
MATR3P43243 MGA-204ENST00000563576 3537 ntTSL 512.12□□□□□ -0.476e-7■■■■□ 26.2
MATR3P43243 EIF4G1-223ENST00000444134 558 ntTSL 511.93□□□□□ -0.56e-7■■■■□ 26.2
MATR3P43243 NECAP1-216ENST00000639167 2197 ntTSL 5 BASIC11.69□□□□□ -0.546e-7■■■■□ 26.2
MATR3P43243 NECAP1-223ENST00000640091 2115 ntTSL 211.42□□□□□ -0.586e-7■■■■□ 26.2
MATR3P43243 HAT1-206ENST00000494601 3845 ntTSL 1 (best)11.39□□□□□ -0.596e-7■■■■□ 26.2
MATR3P43243 MGA-208ENST00000566718 3439 ntTSL 210.95□□□□□ -0.666e-7■■■■□ 26.2
MATR3P43243 NECAP1-219ENST00000639811 2175 ntTSL 5 BASIC10.62□□□□□ -0.716e-7■■■■□ 26.2
MATR3P43243 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.716e-7■■■■□ 26.2
MATR3P43243 NECAP1-215ENST00000639071 2578 ntTSL 510.53□□□□□ -0.726e-7■■■■□ 26.2
MATR3P43243 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.736e-7■■■■□ 26.2
MATR3P43243 NECAP1-207ENST00000544891 4899 ntTSL 510.36□□□□□ -0.756e-7■■■■□ 26.2
MATR3P43243 NECAP1-225ENST00000640209 2473 ntTSL 510.3□□□□□ -0.766e-7■■■■□ 26.2
MATR3P43243 HAT1-204ENST00000457761 1642 ntTSL 1 (best)10□□□□□ -0.816e-7■■■■□ 26.2
MATR3P43243 NECAP1-217ENST00000639276 2646 ntTSL 59.73□□□□□ -0.856e-7■■■■□ 26.2
MATR3P43243 NECAP1-212ENST00000638787 2067 ntTSL 59.7□□□□□ -0.866e-7■■■■□ 26.2
MATR3P43243 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC9.7□□□□□ -0.866e-7■■■■□ 26.2
MATR3P43243 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.886e-7■■■■□ 26.2
MATR3P43243 RUNX1-206ENST00000416754 346 ntTSL 1 (best)9.49□□□□□ -0.896e-7■■■■□ 26.2
MATR3P43243 NECAP1-214ENST00000639038 2423 ntTSL 59.37□□□□□ -0.916e-7■■■■□ 26.2
MATR3P43243 NECAP1-218ENST00000639595 2587 ntTSL 59.34□□□□□ -0.916e-7■■■■□ 26.2
MATR3P43243 NECAP1-227ENST00000640648 5166 ntTSL 59.15□□□□□ -0.946e-7■■■■□ 26.2
MATR3P43243 NECAP1-202ENST00000450991 2446 ntTSL 1 (best)8.95□□□□□ -0.986e-7■■■■□ 26.2
MATR3P43243 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.016e-7■■■■□ 26.2
MATR3P43243 HAT1-203ENST00000412731 1567 ntTSL 1 (best)8.63□□□□□ -1.036e-7■■■■□ 26.2
MATR3P43243 AP3S2-205ENST00000558186 401 ntTSL 48.54□□□□□ -1.046e-7■■■■□ 26.2
MATR3P43243 NECAP1-224ENST00000640099 3313 ntTSL 58.53□□□□□ -1.046e-7■■■■□ 26.2
MATR3P43243 NECAP1-203ENST00000537796 3418 ntTSL 58.32□□□□□ -1.086e-7■■■■□ 26.2
MATR3P43243 NECAP1-213ENST00000638883 3940 ntTSL 57.96□□□□□ -1.146e-7■■■■□ 26.2
MATR3P43243 HAT1-202ENST00000392584 3609 ntTSL 27.8□□□□□ -1.166e-7■■■■□ 26.2
MATR3P43243 NECAP1-220ENST00000639841 1982 ntTSL 57.6□□□□□ -1.196e-7■■■■□ 26.2
MATR3P43243 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.43□□□□□ -1.226e-7■■■■□ 26.2
MATR3P43243 NECAP1-226ENST00000640481 3216 ntTSL 57.34□□□□□ -1.236e-7■■■■□ 26.2
MATR3P43243 NECAP1-222ENST00000640072 3456 ntTSL 57.06□□□□□ -1.286e-7■■■■□ 26.2
MATR3P43243 RCOR3-213ENST00000529763 720 ntTSL 56.89□□□□□ -1.318e-7■■■■□ 26.2
MATR3P43243 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.91□□□□□ -1.468e-7■■■■□ 26.2
MATR3P43243 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.486e-7■■■■□ 26.2
MATR3P43243 CYP51A1-202ENST00000422867 747 ntTSL 35.76□□□□□ -1.496e-7■■■■□ 26.2
MATR3P43243 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.69□□□□□ -1.56e-7■■■■□ 26.2
MATR3P43243 TMEM138-207ENST00000539776 1635 ntTSL 25.59□□□□□ -1.526e-7■■■■□ 26.2
MATR3P43243 RCOR3-215ENST00000534460 427 ntTSL 35.2□□□□□ -1.588e-7■■■■□ 26.2
MATR3P43243 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.666e-7■■■■□ 26.2
MATR3P43243 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.696e-7■■■■□ 26.2
MATR3P43243 RCOR3-206ENST00000485186 434 ntTSL 34.37□□□□□ -1.718e-7■■■■□ 26.2
MATR3P43243 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.716e-7■■■■□ 26.2
MATR3P43243 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.736e-7■■■■□ 26.2
MATR3P43243 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.746e-7■■■■□ 26.2
MATR3P43243 TMEM138-211ENST00000543833 534 ntTSL 23.11□□□□□ -1.916e-7■■■■□ 26.2
MATR3P43243 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.73■■□□□ 1.713e-6■■■■□ 26.2
MATR3P43243 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.19■□□□□ 0.343e-6■■■■□ 26.2
MATR3P43243 ANAPC10-217ENST00000613466 1674 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.44e-6■■■■□ 26.2
MATR3P43243 ANAPC10-204ENST00000502651 867 ntTSL 211.28□□□□□ -0.64e-6■■■■□ 26.2
MATR3P43243 ANAPC10-218ENST00000641499 1538 nt10.89□□□□□ -0.674e-6■■■■□ 26.2
MATR3P43243 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.884e-6■■■■□ 26.2
MATR3P43243 ANAPC10-207ENST00000506851 471 ntTSL 39.5□□□□□ -0.894e-6■■■■□ 26.2
MATR3P43243 ANAPC10-215ENST00000514390 794 ntTSL 38.74□□□□□ -1.014e-6■■■■□ 26.2
MATR3P43243 ANAPC10-211ENST00000510270 963 ntTSL 38.54□□□□□ -1.044e-6■■■■□ 26.2
MATR3P43243 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.044e-6■■■■□ 26.2
MATR3P43243 ANAPC10-214ENST00000513054 689 ntTSL 37.15□□□□□ -1.264e-6■■■■□ 26.2
MATR3P43243 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.394e-6■■■■□ 26.2
MATR3P43243 ANAPC10-212ENST00000511466 687 ntTSL 24.93□□□□□ -1.624e-6■■■■□ 26.2
MATR3P43243 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.211e-6■■■■□ 26.2
MATR3P43243 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.011e-6■■■■□ 26.2
MATR3P43243 KIFC3-229ENST00000567059 509 ntTSL 318.68■□□□□ 0.583e-6■■■■□ 26.2
MATR3P43243 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.893e-7■■■■□ 26.2
MATR3P43243 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.72■□□□□ 0.278e-8■■■■□ 26.2
MATR3P43243 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC13.4□□□□□ -0.268e-8■■■■□ 26.2
MATR3P43243 ACIN1-214ENST00000555352 579 ntTSL 410.43□□□□□ -0.744e-20■■■■□ 26.2
MATR3P43243 CNOT2-240ENST00000552599 2360 ntTSL 27.89□□□□□ -1.159e-7■■■■□ 26.2
MATR3P43243 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.51□□□□□ -1.699e-7■■■■□ 26.2
MATR3P43243 CNOT2-203ENST00000546673 726 ntTSL 33.45□□□□□ -1.869e-7■■■■□ 26.2
MATR3P43243 CNOT2-216ENST00000548939 552 ntTSL 22.87□□□□□ -1.959e-7■■■■□ 26.2
MATR3P43243 CNOT2-211ENST00000548338 355 ntTSL 52.76□□□□□ -1.979e-7■■■■□ 26.2
MATR3P43243 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.92■□□□□ 0.32e-6■■■■□ 26.2
MATR3P43243 SEC24D-208ENST00000506622 1319 ntTSL 215.91■□□□□ 0.142e-6■■■■□ 26.2
MATR3P43243 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.692e-6■■■■□ 26.2
MATR3P43243 SEC24D-209ENST00000509818 1870 ntTSL 1 (best)9.79□□□□□ -0.842e-6■■■■□ 26.2
MATR3P43243 SEC24D-214ENST00000514561 3806 ntTSL 1 (best)5.3□□□□□ -1.562e-6■■■■□ 26.2
MATR3P43243 CDHR3-212ENST00000487084 834 ntTSL 324.55■■□□□ 1.524e-8■■■■□ 26.2
MATR3P43243 CDHR3-210ENST00000474330 1603 ntTSL 522.16■■□□□ 1.144e-8■■■■□ 26.2
MATR3P43243 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.823e-6■■■■□ 26.2
MATR3P43243 SRP54-204ENST00000553923 573 ntTSL 22.3□□□□□ -2.045e-10■■■■□ 26.2
MATR3P43243 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC10.31□□□□□ -0.764e-7■■■■□ 26.1
MATR3P43243 VPS13D-211ENST00000543710 5676 ntTSL 1 (best)8.91□□□□□ -0.984e-7■■■■□ 26.1
MATR3P43243 IMMP1L-203ENST00000527184 486 ntTSL 316.78■□□□□ 0.289e-7■■■■□ 26.1
MATR3P43243 IMMP1L-210ENST00000532624 985 ntTSL 1 (best)15.99■□□□□ 0.159e-7■■■■□ 26.1
MATR3P43243 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.77□□□□□ -0.059e-7■■■■□ 26.1
MATR3P43243 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.91□□□□□ -0.189e-7■■■■□ 26.1
MATR3P43243 IMMP1L-204ENST00000528161 1067 ntTSL 1 (best)13.9□□□□□ -0.189e-7■■■■□ 26.1
MATR3P43243 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC13.45□□□□□ -0.269e-7■■■■□ 26.1
MATR3P43243 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.389e-7■■■■□ 26.1
MATR3P43243 IMMP1L-205ENST00000529749 475 ntTSL 312.68□□□□□ -0.389e-7■■■■□ 26.1
Retrieved 100 of 16,209 protein–RNA pairs in 68.6 ms