RNA–Protein interactions for RNA: ENST00000552599.5

CNOT2-240, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-240ENST00000552599 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
CNOT2-240ENST00000552599 AEBP2Q6ZN18 517 aaPredicted RBP18.2■□□□□ 0.5
CNOT2-240ENST00000552599 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
CNOT2-240ENST00000552599 NISCHQ9Y2I1 1504 aa16■□□□□ 0.15
CNOT2-240ENST00000552599 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
CNOT2-240ENST00000552599 PLPPR3Q6T4P5 718 aa15.06■□□□□ 0
CNOT2-240ENST00000552599 SLC24A1O60721 1099 aa14.89□□□□□ -0.03
CNOT2-240ENST00000552599 ADRA2BP18089 450 aa14.27□□□□□ -0.13
CNOT2-240ENST00000552599 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
CNOT2-240ENST00000552599 FOXD1Q16676 465 aa14.13□□□□□ -0.15
CNOT2-240ENST00000552599 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
CNOT2-240ENST00000552599 KCNA4P22459 653 aa13.87□□□□□ -0.19
CNOT2-240ENST00000552599 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
CNOT2-240ENST00000552599 ZCCHC6Q5VYS8 1495 aaKnown RBP13.47□□□□□ -0.25
CNOT2-240ENST00000552599 PIAS4Q8N2W9 510 aaPredicted RBP13.46□□□□□ -0.25
CNOT2-240ENST00000552599 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
CNOT2-240ENST00000552599 DAXXQ9UER7 740 aaPredicted RBP13.43□□□□□ -0.26
CNOT2-240ENST00000552599 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
CNOT2-240ENST00000552599 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
CNOT2-240ENST00000552599 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
CNOT2-240ENST00000552599 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
CNOT2-240ENST00000552599 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.3
CNOT2-240ENST00000552599 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
CNOT2-240ENST00000552599 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
CNOT2-240ENST00000552599 ABCC9O60706 1549 aa13.09□□□□□ -0.31
CNOT2-240ENST00000552599 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
CNOT2-240ENST00000552599 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
CNOT2-240ENST00000552599 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
CNOT2-240ENST00000552599 MYO15BQ96JP2 1530 aa12.94□□□□□ -0.34
CNOT2-240ENST00000552599 NACADO15069 1562 aa12.86□□□□□ -0.35
CNOT2-240ENST00000552599 SCRIBQ14160 1630 aa12.85□□□□□ -0.35
CNOT2-240ENST00000552599 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
CNOT2-240ENST00000552599 ZBTB22O15209 634 aa12.82□□□□□ -0.36
CNOT2-240ENST00000552599 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
CNOT2-240ENST00000552599 APLP2Q06481 763 aa12.77□□□□□ -0.37
CNOT2-240ENST00000552599 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
CNOT2-240ENST00000552599 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
CNOT2-240ENST00000552599 TTBK1Q5TCY1 1321 aaPredicted RBP12.73□□□□□ -0.37
CNOT2-240ENST00000552599 MYT1Q01538 1121 aa12.69□□□□□ -0.38
CNOT2-240ENST00000552599 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
CNOT2-240ENST00000552599 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
CNOT2-240ENST00000552599 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
CNOT2-240ENST00000552599 MSH5O43196 834 aa12.66□□□□□ -0.38
CNOT2-240ENST00000552599 ARXQ96QS3 562 aa12.64□□□□□ -0.39
CNOT2-240ENST00000552599 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
CNOT2-240ENST00000552599 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
CNOT2-240ENST00000552599 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
CNOT2-240ENST00000552599 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
CNOT2-240ENST00000552599 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
CNOT2-240ENST00000552599 CECR2Q9BXF3 1484 aa12.48□□□□□ -0.41
CNOT2-240ENST00000552599 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
CNOT2-240ENST00000552599 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
CNOT2-240ENST00000552599 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
CNOT2-240ENST00000552599 DNAJC5BQ9UF47 199 aa12.42□□□□□ -0.42
CNOT2-240ENST00000552599 BICRAQ9NZM4 1560 aa12.41□□□□□ -0.42
CNOT2-240ENST00000552599 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
CNOT2-240ENST00000552599 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
CNOT2-240ENST00000552599 RANGAP1P46060 587 aaPredicted RBP12.35□□□□□ -0.43
CNOT2-240ENST00000552599 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-240ENST00000552599 WIZO95785 1651 aa12.32□□□□□ -0.44
CNOT2-240ENST00000552599 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
CNOT2-240ENST00000552599 TPRNQ4KMQ1 711 aa12.27□□□□□ -0.44
CNOT2-240ENST00000552599 HOMEZQ8IX15 550 aa12.27□□□□□ -0.44
CNOT2-240ENST00000552599 DMRT2Q9Y5R5 561 aa12.25□□□□□ -0.45
CNOT2-240ENST00000552599 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
CNOT2-240ENST00000552599 HOXD11P31277 338 aaPredicted RBP12.22□□□□□ -0.45
CNOT2-240ENST00000552599 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
CNOT2-240ENST00000552599 BCANQ96GW7 911 aa12.21□□□□□ -0.45
CNOT2-240ENST00000552599 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.47
CNOT2-240ENST00000552599 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
CNOT2-240ENST00000552599 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
CNOT2-240ENST00000552599 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.47
CNOT2-240ENST00000552599 SMARCA2P51531 1590 aa12.06□□□□□ -0.48
CNOT2-240ENST00000552599 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
CNOT2-240ENST00000552599 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
CNOT2-240ENST00000552599 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
CNOT2-240ENST00000552599 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
CNOT2-240ENST00000552599 GTF3C3Q9Y5Q9 886 aa12.02□□□□□ -0.49
CNOT2-240ENST00000552599 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
CNOT2-240ENST00000552599 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
CNOT2-240ENST00000552599 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
CNOT2-240ENST00000552599 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
CNOT2-240ENST00000552599 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
CNOT2-240ENST00000552599 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
CNOT2-240ENST00000552599 ABCC8Q09428 1581 aa11.89□□□□□ -0.51
CNOT2-240ENST00000552599 HMGXB3Q12766 1538 aa11.88□□□□□ -0.51
CNOT2-240ENST00000552599 FKBP8Q14318 412 aa11.87□□□□□ -0.51
CNOT2-240ENST00000552599 LOC105371045A0A1W2PR82 267 aa11.86□□□□□ -0.51
CNOT2-240ENST00000552599 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
CNOT2-240ENST00000552599 FAM9AQ8IZU1 332 aaPredicted RBP11.82□□□□□ -0.52
CNOT2-240ENST00000552599 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
CNOT2-240ENST00000552599 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.52
CNOT2-240ENST00000552599 ATF5Q9Y2D1 282 aaPredicted RBP11.77□□□□□ -0.52
CNOT2-240ENST00000552599 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
CNOT2-240ENST00000552599 TMEM132AQ24JP5 1023 aa11.74□□□□□ -0.53
CNOT2-240ENST00000552599 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
CNOT2-240ENST00000552599 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
CNOT2-240ENST00000552599 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
CNOT2-240ENST00000552599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.549e-7■□□□□ 9.1
CNOT2-240ENST00000552599 SOGA1O94964 1423 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms