Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHGA5Q9Y5G8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHGA5Q9Y5G8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
PCDHGA5Q9Y5G8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHGA5Q9Y5G8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.09■■■□□ 2.09
PCDHGA5Q9Y5G8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.09■■■□□ 2.09
PCDHGA5Q9Y5G8 AL133380.1-201ENST00000506013 324 ntBASIC28.08■■■□□ 2.09
PCDHGA5Q9Y5G8 MIR3665-201ENST00000578708 105 ntBASIC28.08■■■□□ 2.09
PCDHGA5Q9Y5G8 MIR7108-201ENST00000614319 87 ntBASIC28.08■■■□□ 2.09
PCDHGA5Q9Y5G8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHGA5Q9Y5G8 AC145285.7-201ENST00000614819 1539 ntBASIC28.08■■■□□ 2.08
PCDHGA5Q9Y5G8 ABHD17AP4-201ENST00000411545 909 ntBASIC28.07■■■□□ 2.08
PCDHGA5Q9Y5G8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHGA5Q9Y5G8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHGA5Q9Y5G8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
PCDHGA5Q9Y5G8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.03■■■□□ 2.08
PCDHGA5Q9Y5G8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
PCDHGA5Q9Y5G8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGA5Q9Y5G8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.01■■■□□ 2.07
PCDHGA5Q9Y5G8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28■■■□□ 2.07
PCDHGA5Q9Y5G8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28■■■□□ 2.07
PCDHGA5Q9Y5G8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHGA5Q9Y5G8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.99■■■□□ 2.07
PCDHGA5Q9Y5G8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.93■■■□□ 2.06
PCDHGA5Q9Y5G8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHGA5Q9Y5G8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHGA5Q9Y5G8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
PCDHGA5Q9Y5G8 AC087741.3-201ENST00000624270 1347 ntBASIC27.91■■■□□ 2.06
PCDHGA5Q9Y5G8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
PCDHGA5Q9Y5G8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
PCDHGA5Q9Y5G8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.89■■■□□ 2.06
PCDHGA5Q9Y5G8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.87■■■□□ 2.05
PCDHGA5Q9Y5G8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.86■■■□□ 2.05
PCDHGA5Q9Y5G8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.86■■■□□ 2.05
PCDHGA5Q9Y5G8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGA5Q9Y5G8 AC044849.2-201ENST00000606596 710 ntBASIC27.85■■■□□ 2.05
PCDHGA5Q9Y5G8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGA5Q9Y5G8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGA5Q9Y5G8 HLA-V-202ENST00000446817 847 ntBASIC27.82■■■□□ 2.04
PCDHGA5Q9Y5G8 DUX4L28-201ENST00000623687 678 ntBASIC27.82■■■□□ 2.04
PCDHGA5Q9Y5G8 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.82■■■□□ 2.04
PCDHGA5Q9Y5G8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.82■■■□□ 2.04
PCDHGA5Q9Y5G8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.81■■■□□ 2.04
PCDHGA5Q9Y5G8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.79■■■□□ 2.04
PCDHGA5Q9Y5G8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.78■■■□□ 2.04
PCDHGA5Q9Y5G8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.78■■■□□ 2.04
PCDHGA5Q9Y5G8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDHGA5Q9Y5G8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.76■■■□□ 2.03
PCDHGA5Q9Y5G8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHGA5Q9Y5G8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
PCDHGA5Q9Y5G8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.74■■■□□ 2.03
PCDHGA5Q9Y5G8 MIR762-201ENST00000390236 83 ntBASIC27.73■■■□□ 2.03
PCDHGA5Q9Y5G8 AC005559.1-201ENST00000589661 871 ntBASIC27.72■■■□□ 2.03
PCDHGA5Q9Y5G8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHGA5Q9Y5G8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHGA5Q9Y5G8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.71■■■□□ 2.03
PCDHGA5Q9Y5G8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHGA5Q9Y5G8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
PCDHGA5Q9Y5G8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.68■■■□□ 2.02
PCDHGA5Q9Y5G8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGA5Q9Y5G8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGA5Q9Y5G8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.67■■■□□ 2.02
PCDHGA5Q9Y5G8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.67■■■□□ 2.02
PCDHGA5Q9Y5G8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
PCDHGA5Q9Y5G8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
PCDHGA5Q9Y5G8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.66■■■□□ 2.02
PCDHGA5Q9Y5G8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PCDHGA5Q9Y5G8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.61■■■□□ 2.01
PCDHGA5Q9Y5G8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.61■■■□□ 2.01
PCDHGA5Q9Y5G8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.59■■■□□ 2.01
PCDHGA5Q9Y5G8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHGA5Q9Y5G8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHGA5Q9Y5G8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.57■■■□□ 2
PCDHGA5Q9Y5G8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHGA5Q9Y5G8 ZNRF2P2-203ENST00000454624 420 ntBASIC27.57■■■□□ 2
PCDHGA5Q9Y5G8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.57■■■□□ 2
PCDHGA5Q9Y5G8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.57■■■□□ 2
PCDHGA5Q9Y5G8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.54■■■□□ 2
PCDHGA5Q9Y5G8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCDHGA5Q9Y5G8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCDHGA5Q9Y5G8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.52■■■□□ 2
PCDHGA5Q9Y5G8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.51■■□□□ 1.99
PCDHGA5Q9Y5G8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.5■■□□□ 1.99
PCDHGA5Q9Y5G8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
PCDHGA5Q9Y5G8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PCDHGA5Q9Y5G8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHGA5Q9Y5G8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHGA5Q9Y5G8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHGA5Q9Y5G8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHGA5Q9Y5G8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.42■■□□□ 1.98
PCDHGA5Q9Y5G8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHGA5Q9Y5G8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.41■■□□□ 1.98
PCDHGA5Q9Y5G8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.41■■□□□ 1.98
PCDHGA5Q9Y5G8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGA5Q9Y5G8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHGA5Q9Y5G8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHGA5Q9Y5G8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
PCDHGA5Q9Y5G8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHGA5Q9Y5G8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
PCDHGA5Q9Y5G8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms